RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Gm42715A0A087WP63 3095 aaKnown RBP12.12□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Gm10770F7D043 238 aa12.11□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Prol1E9PYQ4 312 aa12.1□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Nbeal1E9PYP2 2688 aa12.1□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Fam168bQ80XQ8 194 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Gm10197F6QEY5 67 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 A930002H24RikQ8C8Y3 163 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Psors1c2Q80ZC9 134 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Gm3233E9Q2H5 230 aa12.08□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 AplnQ9R0R4 77 aa12.07□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Ighv2-2A0A075B5P8 116 aa12.07□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 P01821 116 aa12.07□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Rpl37aP61514 92 aa12.06□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Gm27235Q3UW50 83 aa12.06□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Krtap11-1E9Q2E9 183 aa12.05□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 AtrQ9JKK8 2635 aa12.04□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Q8BT88 171 aa12.04□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 AI854703Q8BIN3 203 aa12.04□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 PcntP48725 2898 aa12.02□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Usp24B1AY13 2617 aaKnown RBP12.01□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Spint4Q9D263 159 aa11.97□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Sprr4Q8CGN8 76 aa11.97□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Gm12216A0A1W2P827 62 aa11.95□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Defb1P56386 69 aa11.95□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 4930507D05RikQ8C9C9 103 aa11.95□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Lypd5Q9D7Z7 256 aa11.94□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Ep400Q8CHI8 3072 aaKnown RBP11.93□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Gm17689B3GLJ4 109 aa11.93□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Q8BGJ3 129 aa11.93□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Krtap16-1A2A5X5 502 aa11.87□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 CenpfE9Q3P4 2997 aaKnown RBP11.87□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 AY074887Q8R5F9 132 aa11.86□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 Gm10308Q9CVR5 141 aa11.84□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 Plac8Q9JI48 112 aa11.84□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 A530084C06RikQ3UTW2 186 aa11.83□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Eif4ebp3Q80VV3 101 aa11.83□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Gm20661K7N787 53 aa11.82□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Limd2Q8BGB5 128 aa11.82□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 AW011738F6S7Q2 159 aa11.81□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Defb9Q8R2I6 67 aa11.8□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Sprr1bQ62267 153 aa11.8□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Fn1P11276 2477 aaKnown RBP11.79□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Nsd1O88491 2588 aaKnown RBP11.78□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 OxtP35454 125 aa11.77□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Anapc11Q9CPX9 84 aa11.76□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 FlnaQ8BTM8 2647 aaKnown RBP11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Prune2Q52KR3 3084 aa11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Gm7138L7N2C3 230 aa11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Gm3238W4VSP7 230 aa11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 UtrnE9Q6R7 3430 aa11.74□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Dnah12Q3V0Q1 3086 aa11.74□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 C530025M09RikF6RGA8 229 aa11.73□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 TrioQ0KL02 3102 aa11.71□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Hectd1Q69ZR2 2618 aaKnown RBP11.7□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Gcn1E9PVA8 2671 aaKnown RBP11.7□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 7530416G11RikJ3QJX6 159 aa11.7□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Cypt15B1AXS0 87 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Coa5Q99M07 74 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Lelp1Q9DAE3 120 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Gm7137J3QMW1 236 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 A330070K13RikQ8CA53 115 aa11.66□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Rps28P62858 69 aaKnown RBP11.64□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Gm7276Q3TYW4 209 aa11.64□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Notch1Q01705 2531 aa11.61□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Cep350E9Q309 3095 aa11.61□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Phxr5P08399 672 aa11.58□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 CnbpP53996 178 aaKnown RBP11.58□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Rnase13Q5GAM7 153 aa11.58□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Akap13E9Q394 2776 aa11.57□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Jbts17Q8CE72 3214 aa11.57□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Gm11213A0A1B0GR83 88 aa11.56□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Cdc42se1Q8BHL7 80 aa11.56□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Mp68P56379 58 aa11.55□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Dmbt1Q60997 2085 aa11.51□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Zcchc13Q9D548 170 aa11.51□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Fam104aA2A6P4 185 aa11.51□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Prr13Q9CQJ5 137 aa11.5□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Gm26620Q9CY65 116 aa11.5□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Stab1Q8R4Y4 2571 aa11.5□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Mast4Q811L6 2618 aa11.48□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Phxr4P15974 95 aa11.46□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Itpr1P11881 2749 aa11.45□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Gm9195A0A140LHT4 2805 aa11.45□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 HrnrQ8VHD8 2496 aa11.45□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Smim29Q8R043 75 aa11.44□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Lama2Q60675 3118 aaKnown RBP11.43□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Uqcr11Q9CPX8 56 aa11.4□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Chtf8P0CG14 533 aa11.39□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Prrc2cQ3TLH4 2846 aaKnown RBP11.37□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Gm11565A2A4M7 156 aa11.37□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 NbdyA0A0N4SUI7 68 aa11.36□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Lama3Q61789 3330 aa11.35□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Cypt14J3QPF7 87 aa11.34□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Gm9821Q8K076 103 aa11.33□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 2310034C09RikQ9D746 214 aa11.33□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Gm10065F6TJM2 114 aa11.31□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Fam229bQ8CF36 80 aa11.31□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Kmt2bO08550 2713 aa11.3□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Usp34Q6ZQ93 3582 aa11.28□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Gm7173A0A0G2JEB6 3132 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms