RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 RnasekQ8K3C0 98 aa8.66□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 LbhQ9CX60 105 aa8.66□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 Ociad2Q9D8W7 154 aa8.66□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 Pfn2Q9JJV2 140 aa8.66□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 Gm11569B1AQB1 180 aa8.65□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 4930432M17RikQ3V0W9 174 aa8.65□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 Urm1Q9D2P4 101 aa8.65□□□□□ -1.02
Sf3b6-201ENSMUST00000046207 Gm10845Q3UNY9 185 aa8.64□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 TeppQ6IMH0 216 aa8.64□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Olfr983Q8VG90 315 aa8.64□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Igkv3-5A0A140T8M6 119 aa8.63□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Rps29P62274 56 aa8.63□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Igkv3-10A0A0G2JGN0 119 aa8.62□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Defa28D3Z1V9 94 aa8.62□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Gm10139O88245 57 aa8.62□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Spaca4Q80ZQ0 127 aa8.62□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Gm9821Q8K076 103 aa8.62□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Iglc1A0A0G2JE99 106 aa8.61□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Esp34G3UXG0 151 aa8.61□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Q3UUX7 111 aa8.61□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Defa22Q8C1N8 93 aa8.59□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Q9DAA7 145 aa8.59□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Cd164Q9R0L9 197 aa8.59□□□□□ -1.03
Sf3b6-201ENSMUST00000046207 Cypt14J3QPF7 87 aa8.58□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 P01837 106 aa8.58□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Cox7bP56393 80 aa8.58□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Wfdc13Q5DQQ6 81 aa8.58□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 1700011M02RikB1AX35 88 aa8.57□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Gm9047B9EJX3 177 aa8.57□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Prelid3aQ8VE85 172 aa8.57□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Sec61bQ9CQS8 96 aaKnown RBP8.57□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 1700010B08RikQ9DAI7 102 aa8.57□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Gm21834J3QN05 151 aa8.56□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 NpyP57774 97 aa8.56□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Rmi2Q3UPE3 149 aa8.56□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Chac1Q8R3J5 223 aa8.56□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Stard4Q99JV5 224 aa8.55□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Lce1gQ9D195 139 aa8.55□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Igkv8-26A0A075B5N5 123 aa8.54□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Syne2Q6ZWQ0 6874 aaKnown RBP8.53□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Brd3osA0A1B0GRB6 84 aa8.53□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 Mrps10Q80ZK0 160 aaKnown RBP8.53□□□□□ -1.04
Sf3b6-201ENSMUST00000046207 SnrpeP62305 92 aaKnown RBP8.52□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Fam213bQ9DB60 201 aa8.52□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Slamf6Q9ET39 351 aa8.52□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Gm26727M0QWT1 121 aa8.51□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Dph3Q8K0W9 82 aa8.51□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 SspoQ8CG65 4998 aa8.5□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Igkv1-117A0A140T8M0 119 aa8.5□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 2310034G01RikA0A286YDL3 209 aa8.5□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Grcc10O35127 126 aa8.5□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Spata45Q9CVW4 97 aa8.5□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Wdr38Q9D994 303 aa8.5□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Gm42420A0A0J9YUQ2 99 aa8.49□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Hist1h2bmP10854 126 aa8.49□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Hist1h2bhQ64478 126 aa8.49□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Hist2h2bbQ64525 126 aa8.49□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Hist1h2bcQ6ZWY9 126 aaKnown RBP8.49□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 BC048502Q80Y74 154 aa8.49□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Igkv8-18A0A0B4J1J3 123 aa8.48□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 Ssbp1Q9CYR0 152 aaKnown RBP8.48□□□□□ -1.05
Sf3b6-201ENSMUST00000046207 9130204L05RikG3UWB8 92 aa8.46□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Gm2310J3QNJ2 377 aa8.46□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Tomm6Q9CQN3 74 aa8.46□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Hsbp1l1B2RXB2 72 aa8.45□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 S100a8P27005 89 aa8.45□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Tcl1b3P56842 122 aa8.45□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Sostdc1Q9CQN4 206 aa8.45□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Cited4Q9WUL8 182 aa8.44□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Chchd1Q9CQA6 118 aa8.43□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Krtap15-1Q9QZU5 150 aa8.43□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Ccl25O35903 144 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Gm5153P01627 120 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Hist3h2bbQ8CGP0 126 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Csdc2Q91YQ3 154 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Mustn1Q99JI1 82 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Ndufc2Q9CQ54 120 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Hist3h2baQ9D2U9 126 aa8.42□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Gm38119A0A0A6YX29 146 aa8.41□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Trav13n-2A0A0G2JF93 110 aa8.41□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Gm42674D3YUT9 64 aa8.41□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Gm9805F6YK59 57 aa8.41□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Krtap19-3Q925H6 87 aa8.41□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 PpdpfQ9CR37 115 aa8.41□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Fam240aJ3QNP9 97 aa8.4□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 Gm7276Q3TYW4 209 aa8.4□□□□□ -1.06
Sf3b6-201ENSMUST00000046207 BC107364E9Q5A2 140 aa8.39□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 4930442H23RikQ9D5G7 103 aa8.39□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Timm10bQ9WV96 100 aa8.39□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Gm10770F7D043 238 aa8.38□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Scgb1b10A0A087WPW0 93 aa8.37□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Trav4-3A0A0B4J1K1 110 aa8.37□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Gm11020F6ZGD5 61 aa8.37□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Gpx1P11352 201 aa8.37□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Krtap16-3Q8C1I6 86 aa8.37□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Krtap19-1Q925H2 87 aa8.37□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Ctxnd2A0A1B0GQX3 59 aa8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 1700042G07RikB1AUF7 90 aa8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Hist1h2bfP10853 126 aa8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Rpl32-psP17932 135 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms