RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 NipblQ6KCD5 2798 aaKnown RBP3.2□□□□□ -1.9
Prkdc-201ENSMUST00000023352 2310034G01RikA0A286YDL3 209 aa3.2□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Ly6g6cQ9Z1Q4 126 aa3.2□□□□□ -1.9
Prkdc-201ENSMUST00000023352 RetnlbQ99P86 105 aa3.2□□□□□ -1.9
Prkdc-201ENSMUST00000023352 4930519P11RikQ9CUJ8 166 aa3.2□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Defb10Q8R2I8 73 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Lce6aD3YV94 81 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Prh1P05142 261 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 AtrQ9JKK8 2635 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Mast4Q811L6 2618 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 SmcpP15265 143 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Utp20Q5XG71 2788 aaKnown RBP3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 CdsnQ7TPC1 561 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Defb11Q8R2I7 77 aa3.19□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Gm11213A0A1B0GR83 88 aa3.18□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Cdh23Q99PF4 3354 aa3.18□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Dmac1Q9CQ00 111 aa3.18□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Jbts17Q8CE72 3214 aa3.18□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Gm9767G3X930 207 aa3.18□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Gm10267M0QWD8 85 aa3.18□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Gm9195A0A140LHT4 2805 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Sprr1bQ62267 153 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 2010109I03RikQ9CQ11 111 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Defb40Q70KL2 73 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Col6a5A6H584 2640 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 P01755 137 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Coa5Q99M07 74 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Mrpl34Q99N91 92 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Myo15bI7HPW8 3033 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 PrlhG3UWC3 86 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Dnah12Q3V0Q1 3086 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Msrb1Q9JLC3 116 aa3.17□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Wfdc17Q5SSJ1 76 aa3.16□□□□□ -1.9
Prkdc-201ENSMUST00000023352 MobpQ9D2P8 170 aa3.16□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Wfdc13Q5DQQ6 81 aa3.16□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Stab1Q8R4Y4 2571 aa3.16□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Gpha2Q925Q5 128 aa3.15□□□□□ -1.9
Prkdc-201ENSMUST00000023352 Spata3Q9D9T6 193 aa3.15□□□□□ -1.9
Prkdc-201ENSMUST00000023352 A930002H24RikQ8C8Y3 163 aa3.15□□□□□ -1.91
Prkdc-201ENSMUST00000023352 PcntP48725 2898 aa3.15□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Cypt15B1AXS0 87 aa3.15□□□□□ -1.91
Prkdc-201ENSMUST00000023352 HttP42859 3119 aa3.14□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Igsf10Q3V1M1 2594 aa3.14□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Sostdc1Q9CQN4 206 aa3.14□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm42715A0A087WP63 3095 aaKnown RBP3.14□□□□□ -1.91
Prkdc-201ENSMUST00000023352 A730009L09RikA0A1B0GS82 72 aa3.14□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm21886J3QJU9 214 aa3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 D730001G18RikA0A087WQU7 115 aa3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm7276Q3TYW4 209 aa3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Chd7A2AJK6 2986 aaKnown RBP3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Tep1P97499 2629 aa3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm44790A0A0N4SV91 103 aa3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm27235Q3UW50 83 aa3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 FlnbQ80X90 2602 aaKnown RBP3.13□□□□□ -1.91
Prkdc-201ENSMUST00000023352 CnbpP53996 178 aaKnown RBP3.12□□□□□ -1.91
Prkdc-201ENSMUST00000023352 AplnQ9R0R4 77 aa3.12□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm10770F7D043 238 aa3.12□□□□□ -1.91
Prkdc-201ENSMUST00000023352 CriptO70333 101 aa3.12□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Defb50Q6TU36 73 aa3.12□□□□□ -1.91
Prkdc-201ENSMUST00000023352 1810062G17RikG3X8Y2 129 aa3.11□□□□□ -1.91
Prkdc-201ENSMUST00000023352 1700042G07RikB1AUF7 90 aa3.1□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Cep350E9Q309 3095 aa3.1□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Itpr1P11881 2749 aa3.09□□□□□ -1.91
Prkdc-201ENSMUST00000023352 Gm20661K7N787 53 aa3.09□□□□□ -1.91
Prkdc-201ENSMUST00000023352 1600014C23RikQ9DAX4 101 aa3.08□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Pkd1l1Q8R526 2615 aa3.08□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Phf5aP83870 110 aaKnown RBP3.08□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Lama2Q60675 3118 aaKnown RBP3.08□□□□□ -1.92
Prkdc-201ENSMUST00000023352 A0A286YCN5 57 aa3.08□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Smim29Q8R043 75 aa3.08□□□□□ -1.92
Prkdc-201ENSMUST00000023352 E130208F15RikQ3UPV3 143 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Stab2Q8R4U0 2559 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Cypt14J3QPF7 87 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Q8BT88 171 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Gm26620Q9CY65 116 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Gm10999F6Q4M4 69 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Szt2A2A9C3 3431 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Itpr3P70227 2670 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Gm10772F7AIG4 85 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 AY074887Q8R5F9 132 aa3.07□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Lypd5Q9D7Z7 256 aa3.06□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Defb2P82020 71 aa3.06□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Nbeal2Q6ZQA0 2742 aa3.06□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Pla2g10Q9QXX3 151 aa3.06□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Defb39Q70KL3 74 aa3.05□□□□□ -1.92
Prkdc-201ENSMUST00000023352 TrioQ0KL02 3102 aa3.05□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Snhg11Q4G0K9 87 aa3.05□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Gpr15lA0A0B4J1N3 78 aa3.05□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Gm5617Q91VN2 117 aa3.05□□□□□ -1.92
Prkdc-201ENSMUST00000023352 C530025M09RikF6RGA8 229 aa3.05□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Rnase13Q5GAM7 153 aa3.04□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Defb38Q7TNV7 63 aa3.04□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Unc80Q8BLN6 3261 aa3.04□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Tex15F8VPN2 2785 aa3.04□□□□□ -1.92
Prkdc-201ENSMUST00000023352 OxtP35454 125 aa3.04□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Krtap24-1G3X9A2 248 aa3.04□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Gm9955Q8CEJ8 102 aa3.03□□□□□ -1.92
Prkdc-201ENSMUST00000023352 Phxr5P08399 672 aa3.03□□□□□ -1.92
Prkdc-201ENSMUST00000023352 1700018G05RikA0A1B0GSI2 66 aa3.02□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Spaca4Q80ZQ0 127 aa3.02□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms