RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Sfta2E9PXB6 77 aa7.92□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Gm9767G3X930 207 aa7.92□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Atox1O08997 68 aaKnown RBP7.91□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Klk9Q32M27 251 aa7.91□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Erdr1J3QMM0 206 aa7.9□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Cdc42se2Q8BGH7 84 aa7.9□□□□□ -1.14
Sdc1-201ENSMUST00000020911 CicQ924A2 2510 aa7.9□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Spink4O35679 86 aa7.9□□□□□ -1.14
Sdc1-201ENSMUST00000020911 Plac8l1Q08EJ0 177 aa7.89□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Tex15F8VPN2 2785 aa7.89□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Igkv4-68A0A0B4J1I7 117 aa7.89□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Tenm4Q3UHK6 2771 aa7.89□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Ighv2-9A0A075B5Q5 116 aa7.89□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Nop10Q9CQS2 64 aa7.89□□□□□ -1.15
Sdc1-201ENSMUST00000020911 2010109I03RikQ9CQ11 111 aa7.87□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Nbeal2Q6ZQA0 2742 aa7.87□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Prh1P05142 261 aa7.87□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Cox17P56394 63 aa7.86□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Fbn1Q61554 2873 aaKnown RBP7.86□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Hivep1Q03172 2688 aa7.86□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Ly6c2P0CW03 131 aa7.85□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Igkv3-3A0A140T8Q0 119 aa7.85□□□□□ -1.15
Sdc1-201ENSMUST00000020911 A730071L15RikQ8C4X0 137 aa7.85□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Trav9d-3A0A075B695 113 aa7.85□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Igkv8-18A0A0B4J1J3 123 aa7.85□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Lypd5Q9D7Z7 256 aa7.85□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Ighv2-5A0A0A6YY69 116 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Sox16Q62247 57 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Coa6Q8BGD8 79 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Defb42Q8BVB5 75 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Q99M08 65 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Gm26620Q9CY65 116 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Zfand2aQ9JII7 171 aa7.84□□□□□ -1.15
Sdc1-201ENSMUST00000020911 Igkv8-34A0A0G2JDU0 121 aa7.83□□□□□ -1.16
Sdc1-201ENSMUST00000020911 A330070K13RikQ8CA53 115 aa7.83□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Stab1Q8R4Y4 2571 aa7.83□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Itpr2Q9Z329 2701 aa7.82□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Gm16181B0V2H2 73 aa7.82□□□□□ -1.16
Sdc1-201ENSMUST00000020911 9530003J23RikQ8BM26 151 aa7.82□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Coa5Q99M07 74 aa7.82□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Krtap24-1G3X9A2 248 aa7.82□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Gm17509Q9CZ61 145 aa7.82□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Wfdc12Q9JHY3 85 aa7.81□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Defb37Q7TMD2 62 aa7.8□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Nsd1O88491 2588 aaKnown RBP7.8□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Ube2bP63147 152 aa7.79□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Tomm7Q9D173 55 aa7.79□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Igkv8-24A0A140T8P5 121 aa7.79□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Tenm1Q9WTS4 2731 aa7.78□□□□□ -1.16
Sdc1-201ENSMUST00000020911 PolqQ8CGS6 2544 aa7.78□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Igkv8-28A0A0G2JE47 121 aa7.78□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Leap2Q91V13 76 aa7.77□□□□□ -1.16
Sdc1-201ENSMUST00000020911 Msrb1Q9JLC3 116 aa7.77□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Trav9n-4A0A075B631 113 aa7.76□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Gm10518F6UQQ9 182 aa7.76□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Gm9805F6YK59 57 aa7.76□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Ighv2-2A0A075B5P8 116 aa7.75□□□□□ -1.17
Sdc1-201ENSMUST00000020911 P01821 116 aa7.75□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Notch1Q01705 2531 aa7.75□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Gm3646F6S692 53 aa7.74□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Col6a5A6H584 2640 aa7.74□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Igkv3-2A0A075B5P0 119 aa7.74□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Igkv8-16A0A0G2JDG9 121 aa7.72□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Reg3dQ9QUS9 175 aa7.72□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Phxr4P15974 95 aa7.72□□□□□ -1.17
Sdc1-201ENSMUST00000020911 MobpQ9D2P8 170 aa7.72□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Ube2aQ9Z255 152 aa7.72□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Pla2g1bQ9Z0Y2 146 aa7.71□□□□□ -1.17
Sdc1-201ENSMUST00000020911 Igkv4-61A0A0G2JH00 117 aa7.71□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Gm10770F7D043 238 aa7.71□□□□□ -1.18
Sdc1-201ENSMUST00000020911 9530053A07RikE9PVG8 2581 aa7.71□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv4-92A0A0B4J1I2 117 aa7.71□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Pde6gP09174 87 aa7.7□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv8-19A0A0G2JFN8 121 aa7.7□□□□□ -1.18
Sdc1-201ENSMUST00000020911 A0A286YCN5 57 aa7.7□□□□□ -1.18
Sdc1-201ENSMUST00000020911 U90926O08546 118 aa7.7□□□□□ -1.18
Sdc1-201ENSMUST00000020911 SptssbQ925E8 76 aa7.69□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Gm10772F7AIG4 85 aa7.68□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv4-54A0A0G2JES9 117 aa7.68□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Defb40Q70KL2 73 aa7.67□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Gpha2Q925Q5 128 aa7.67□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv4-72A0A0B4J1I4 117 aa7.66□□□□□ -1.18
Sdc1-201ENSMUST00000020911 C130032M10RikQ8C888 123 aa7.66□□□□□ -1.18
Sdc1-201ENSMUST00000020911 PtprqP0C5E4 2300 aa7.66□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Chchd7Q8K2Q5 85 aa7.66□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Srrm2Q8BTI8 2703 aaKnown RBP7.65□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv3-7A0A0G2JE31 119 aa7.65□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv1-122A0A140T8M9 119 aa7.65□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Igkv3-1A0A075B5P1 119 aa7.65□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Gm9821Q8K076 103 aa7.65□□□□□ -1.18
Sdc1-201ENSMUST00000020911 Gm7138L7N2C3 230 aa7.64□□□□□ -1.19
Sdc1-201ENSMUST00000020911 PrcdQ00LT2 53 aa7.64□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Gm3238W4VSP7 230 aa7.64□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Gm10643Q3URG9 111 aa7.64□□□□□ -1.19
Sdc1-201ENSMUST00000020911 D730001G18RikA0A087WQU7 115 aa7.63□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Igkv1-88A0A140T8N1 120 aa7.63□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Cox7bP56393 80 aa7.63□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Tcl1b3P56842 122 aa7.61□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Wfdc13Q5DQQ6 81 aa7.61□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Sprr2jO70561 109 aa7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 152.8 ms