RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Ly6g6cQ9Z1Q4 126 aa11□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Ighv1-56A0A0A6YXG2 117 aa11□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Csdc2Q91YQ3 154 aa11□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Reg3aO09037 175 aa10.99□□□□□ -0.65
Ubr2-201ENSMUST00000113335 4930518I15RikQ3V2W7 57 aa10.99□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Ntn5Q3UQ22 452 aa10.99□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Gm9573F7C950 1606 aa10.99□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Defb37Q7TMD2 62 aa10.98□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Gm10197F6QEY5 67 aa10.98□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Defb39Q70KL3 74 aa10.98□□□□□ -0.65
Ubr2-201ENSMUST00000113335 3110070M22RikQ9DAQ7 118 aa10.98□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Lrp4Q8VI56 1905 aa10.97□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Spint4Q9D263 159 aa10.97□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Defb45Q3V490 66 aa10.97□□□□□ -0.65
Ubr2-201ENSMUST00000113335 PtprbB2RU80 1998 aa10.97□□□□□ -0.65
Ubr2-201ENSMUST00000113335 Coa6Q8BGD8 79 aa10.96□□□□□ -0.66
Ubr2-201ENSMUST00000113335 Igkv8-19A0A0G2JFN8 121 aa10.95□□□□□ -0.66
Ubr2-201ENSMUST00000113335 Mrpl34Q99N91 92 aa10.94□□□□□ -0.66
Ubr2-201ENSMUST00000113335 A730009L09RikA0A1B0GS82 72 aa10.93□□□□□ -0.66
Ubr2-201ENSMUST00000113335 6430550D23RikE9Q1X6 194 aa10.93□□□□□ -0.66
Ubr2-201ENSMUST00000113335 Defb10Q8R2I8 73 aa10.92□□□□□ -0.66
Ubr2-201ENSMUST00000113335 Cox6a2P43023 97 aa10.92□□□□□ -0.66
Ubr2-201ENSMUST00000113335 SrcapA0A087WQ44 3271 aa10.91□□□□□ -0.66
Ubr2-201ENSMUST00000113335 1700018G05RikA0A1B0GSI2 66 aa10.9□□□□□ -0.66
Ubr2-201ENSMUST00000113335 Hivep2Q3UHF7 2430 aa10.9□□□□□ -0.66
Ubr2-201ENSMUST00000113335 Gm3285A0A1W2P7U0 201 aa10.9□□□□□ -0.67
Ubr2-201ENSMUST00000113335 PolqQ8CGS6 2544 aa10.88□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Fam19a3Q7TPG6 132 aa10.87□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Msrb1Q9JLC3 116 aa10.87□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Sostdc1Q9CQN4 206 aa10.86□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Ighv2-5A0A0A6YY69 116 aa10.85□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Gm43218A0A0G2JGT0 114 aa10.85□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Gm10160F6Y577 67 aa10.85□□□□□ -0.67
Ubr2-201ENSMUST00000113335 Ankhd1E9PUR0 2548 aaKnown RBP10.84□□□□□ -0.67
Ubr2-201ENSMUST00000113335 A530084C06RikQ3UTW2 186 aa10.83□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Igkv8-27A0A0G2JF28 120 aa10.83□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Gm28374F6SG70 93 aa10.83□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Chchd10Q7TNL9 138 aa10.83□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Piezo2Q8CD54 2822 aa10.83□□□□□ -0.68
Ubr2-201ENSMUST00000113335 CrygaP04345 174 aa10.83□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Lrrk2Q5S006 2527 aa10.82□□□□□ -0.68
Ubr2-201ENSMUST00000113335 AI854703Q8BIN3 203 aa10.82□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Col27a1Q5QNQ9 1845 aa10.82□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Gm21886J3QJU9 214 aa10.81□□□□□ -0.68
Ubr2-201ENSMUST00000113335 P01819 144 aa10.81□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Gm10642Q3TWM1 71 aa10.81□□□□□ -0.68
Ubr2-201ENSMUST00000113335 MobpQ9D2P8 170 aa10.8□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Tln1P26039 2541 aaKnown RBP10.79□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Gm44790A0A0N4SV91 103 aa10.78□□□□□ -0.68
Ubr2-201ENSMUST00000113335 2310034G01RikA0A286YDL3 209 aa10.78□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Gm12216A0A1W2P827 62 aa10.78□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Ighv2-2A0A075B5P8 116 aa10.78□□□□□ -0.68
Ubr2-201ENSMUST00000113335 P01821 116 aa10.78□□□□□ -0.68
Ubr2-201ENSMUST00000113335 Gm17606F6ZL36 78 aa10.77□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Elof1P60003 83 aa10.77□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Srsf12Q8C8K3 266 aa10.76□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Krtap16-1A2A5X5 502 aa10.76□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Dmac1Q9CQ00 111 aa10.74□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Gm11627A6PWP4 55 aa10.74□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Gm10999F6Q4M4 69 aa10.74□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Rps28P62858 69 aaKnown RBP10.73□□□□□ -0.69
Ubr2-201ENSMUST00000113335 E130208F15RikQ3UPV3 143 aa10.73□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Defb50Q6TU36 73 aa10.71□□□□□ -0.69
Ubr2-201ENSMUST00000113335 Gm10770F7D043 238 aa10.71□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Gm16181B0V2H2 73 aa10.69□□□□□ -0.7
Ubr2-201ENSMUST00000113335 AI606181Q8C7B9 129 aa10.69□□□□□ -0.7
Ubr2-201ENSMUST00000113335 A930002H24RikQ8C8Y3 163 aa10.68□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Sptbn4E9PX29 2561 aa10.68□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Col4a2P08122 1707 aa10.68□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Chd8Q09XV5 2582 aaKnown RBP10.68□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Prr13Q9CQJ5 137 aa10.68□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Snhg11Q4G0K9 87 aa10.67□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Rpl37aP61514 92 aa10.67□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Phf5aP83870 110 aaKnown RBP10.66□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Gm17689B3GLJ4 109 aa10.65□□□□□ -0.7
Ubr2-201ENSMUST00000113335 Piezo1E2JF22 2547 aa10.65□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Gm9903Q8C9Y8 129 aa10.64□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Gm20661K7N787 53 aa10.64□□□□□ -0.71
Ubr2-201ENSMUST00000113335 AplnQ9R0R4 77 aa10.64□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Usp9xP70398 2559 aaKnown RBP10.63□□□□□ -0.71
Ubr2-201ENSMUST00000113335 7530416G11RikJ3QJX6 159 aa10.63□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Limd2Q8BGB5 128 aa10.63□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Defb1P56386 69 aa10.63□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Gm10308Q9CVR5 141 aa10.63□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Gm10772F7AIG4 85 aa10.61□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Gm26661M0QWV4 156 aa10.61□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Krtap24-1G3X9A2 248 aa10.59□□□□□ -0.71
Ubr2-201ENSMUST00000113335 Gpr15lA0A0B4J1N3 78 aa10.58□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Znf414Q9DCK4 299 aa10.58□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Mp68P56379 58 aa10.58□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Spaca4Q80ZQ0 127 aa10.57□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Q8BT88 171 aa10.56□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Hcfc1Q61191 2045 aaKnown RBP10.55□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Col5a1O88207 1838 aa10.55□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Coa5Q99M07 74 aa10.55□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Krtap26-1Q9D7N2 215 aa10.55□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Prol1E9PYQ4 312 aa10.54□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Gm3250E9Q1M3 230 aa10.54□□□□□ -0.72
Ubr2-201ENSMUST00000113335 Fam168bQ80XQ8 194 aa10.53□□□□□ -0.72
Ubr2-201ENSMUST00000113335 4930507D05RikQ8C9C9 103 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 7 ms