RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gm28230A0A0A0MQ91 144 aa10.35□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Fam19a3Q7TPG6 132 aa10.35□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 P01819 144 aa10.34□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Coa6Q8BGD8 79 aa10.34□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Igkv8-19A0A0G2JFN8 121 aa10.33□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Cdip1Q9DB75 208 aa10.32□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm16181B0V2H2 73 aa10.32□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Psors1c2Q80ZC9 134 aa10.32□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Cd164Q9R0L9 197 aa10.32□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Kiaa1549Q68FD9 1940 aa10.32□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Ighv2-2A0A075B5P8 116 aa10.31□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 P01821 116 aa10.31□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 CrygaP04345 174 aa10.31□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Notch2O35516 2470 aa10.31□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm26661M0QWV4 156 aa10.31□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Defb45Q3V490 66 aa10.31□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm10300Q8C8P7 189 aa10.3□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 1600014C23RikQ9DAX4 101 aa10.3□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Col5a1O88207 1838 aa10.3□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm11627A6PWP4 55 aa10.3□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm28374F6SG70 93 aa10.29□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Cox6a2P43023 97 aa10.29□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Defb38Q7TNV7 63 aa10.29□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm9903Q8C9Y8 129 aa10.29□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Col4a2P08122 1707 aa10.28□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 MobpQ9D2P8 170 aa10.28□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Wfdc3Q14AE4 130 aa10.28□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Wfdc17Q5SSJ1 76 aa10.28□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 Gm10570F6VB42 170 aa10.28□□□□□ -0.76
Pcdh20-201ENSMUST00000061628 SnurfQ9WU12 71 aa10.25□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Msrb1Q9JLC3 116 aa10.25□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Mrpl34Q99N91 92 aa10.24□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Krtap26-1Q9D7N2 215 aa10.24□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 4930518I15RikQ3V2W7 57 aa10.23□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Pkd1l2Q7TN88 2461 aa10.23□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 A730009L09RikA0A1B0GS82 72 aa10.23□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 6430550D23RikE9Q1X6 194 aa10.22□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Reg3aO09037 175 aa10.22□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Gm3285A0A1W2P7U0 201 aa10.21□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 Dmac1Q9CQ00 111 aa10.21□□□□□ -0.77
Pcdh20-201ENSMUST00000061628 E130208F15RikQ3UPV3 143 aa10.2□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Elof1P60003 83 aa10.2□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 4930519P11RikQ9CUJ8 166 aa10.2□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Gm10160F6Y577 67 aa10.2□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Chd8Q09XV5 2582 aaKnown RBP10.19□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 2310034G01RikA0A286YDL3 209 aa10.18□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Rps28P62858 69 aaKnown RBP10.17□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Nav3Q80TN7 2359 aa10.17□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Hivep3A2A884 2348 aa10.17□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Gm10837Q3UTT8 145 aa10.17□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Sostdc1Q9CQN4 206 aa10.16□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Spint4Q9D263 159 aa10.16□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Bean1Q9EQG5 255 aa10.16□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Defb39Q70KL3 74 aa10.15□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Sptbn4E9PX29 2561 aa10.15□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Gm10197F6QEY5 67 aa10.15□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Limd2Q8BGB5 128 aa10.15□□□□□ -0.78
Pcdh20-201ENSMUST00000061628 Krtap16-1A2A5X5 502 aa10.15□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Gm21886J3QJU9 214 aa10.15□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Gm17606F6ZL36 78 aa10.14□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 1700018G05RikA0A1B0GSI2 66 aa10.13□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Usp9xP70398 2559 aaKnown RBP10.13□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Igkv8-27A0A0G2JF28 120 aa10.13□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Defb37Q7TMD2 62 aa10.12□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Prol1E9PYQ4 312 aa10.11□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Defb11Q8R2I7 77 aa10.1□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Ptpn13Q64512 2453 aa10.09□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Gm10642Q3TWM1 71 aa10.09□□□□□ -0.79
Pcdh20-201ENSMUST00000061628 Znf414Q9DCK4 299 aa10.08□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Krtap24-1G3X9A2 248 aa10.08□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Piezo2Q8CD54 2822 aa10.07□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Snhg11Q4G0K9 87 aa10.06□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Gm10308Q9CVR5 141 aa10.06□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Spata3Q9D9T6 193 aa10.05□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Gm44790A0A0N4SV91 103 aa10.04□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 Gm10772F7AIG4 85 aa10.04□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 AI606181Q8C7B9 129 aa10.04□□□□□ -0.8
Pcdh20-201ENSMUST00000061628 AI854703Q8BIN3 203 aa10.02□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 PtprqP0C5E4 2300 aa10.01□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 Gm12216A0A1W2P827 62 aa10□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 4930507D05RikQ8C9C9 103 aa10□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 Gm10770F7D043 238 aa10□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 Gm27235Q3UW50 83 aa9.99□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 Defb50Q6TU36 73 aa9.99□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 A530084C06RikQ3UTW2 186 aa9.98□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 A930002H24RikQ8C8Y3 163 aa9.98□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 Phf5aP83870 110 aaKnown RBP9.97□□□□□ -0.81
Pcdh20-201ENSMUST00000061628 Gm10999F6Q4M4 69 aa9.96□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 AW011738F6S7Q2 159 aa9.95□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 SetxA2AKX3 2646 aa9.95□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 TrrapQ80YV3 2565 aaKnown RBP9.94□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 Alms1Q8K4E0 3251 aa9.94□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 Gpr15lA0A0B4J1N3 78 aa9.93□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 Q8BT88 171 aa9.9□□□□□ -0.82
Pcdh20-201ENSMUST00000061628 Cdc42se1Q8BHL7 80 aa9.89□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 PolqQ8CGS6 2544 aa9.89□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Sprr1bQ62267 153 aa9.89□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Sprr4Q8CGN8 76 aa9.89□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Gm17689B3GLJ4 109 aa9.88□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Gm20661K7N787 53 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms