RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Igkv8-27A0A0G2JF28 120 aa8.66□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Nupr2Q497P3 102 aa8.66□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Q9DAB9 146 aa8.66□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Golgb1E9PVZ8 3238 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Igkv8-28A0A0G2JE47 121 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 NrgnP60761 78 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Flg2Q2VIS4 2362 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Gm17509Q9CZ61 145 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Gm9925F6T2U3 160 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 1110002E22RikE0CYV9 1786 aa8.65□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Cox6a2P43023 97 aa8.64□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 FshbQ60687 130 aa8.64□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Znf414Q9DCK4 299 aa8.64□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 DscamQ9ERC8 2013 aa8.64□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Ighv2-2A0A075B5P8 116 aa8.64□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 P01821 116 aa8.64□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 AI606181Q8C7B9 129 aa8.63□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 PtprbB2RU80 1998 aa8.63□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 AvpP35455 168 aa8.63□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Cdc42se1Q8BHL7 80 aa8.63□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Ighv2-9A0A075B5Q5 116 aa8.62□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Gm20661K7N787 53 aa8.61□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Gm21886J3QJU9 214 aa8.61□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Msrb1Q9JLC3 116 aa8.61□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Chchd10Q7TNL9 138 aa8.6□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Mp68P56379 58 aa8.6□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Piezo2Q8CD54 2822 aa8.59□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 A930009A15RikG3UYI6 118 aa8.59□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 1700018G05RikA0A1B0GSI2 66 aa8.59□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Gm28374F6SG70 93 aa8.59□□□□□ -1.03
Pcdhac1-201ENSMUST00000007584 Gm11213A0A1B0GR83 88 aa8.58□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Gm44790A0A0N4SV91 103 aa8.58□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Gm17689B3GLJ4 109 aa8.57□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Coa5Q99M07 74 aa8.57□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Gm10308Q9CVR5 141 aa8.56□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Wdr90Q6ZPG2 1874 aa8.56□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 AplnQ9R0R4 77 aa8.56□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Gm3443F7CCV5 94 aa8.55□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Tln1P26039 2541 aaKnown RBP8.55□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 D730001G18RikA0A087WQU7 115 aa8.55□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Gm5617Q91VN2 117 aa8.53□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Defb39Q70KL3 74 aa8.53□□□□□ -1.04
Pcdhac1-201ENSMUST00000007584 Gm10999F6Q4M4 69 aa8.52□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Adm2Q7TNK8 150 aa8.52□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Igkv8-19A0A0G2JFN8 121 aa8.52□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Phxr4P15974 95 aa8.52□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm10643Q3URG9 111 aa8.52□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Usp9xP70398 2559 aaKnown RBP8.52□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 A930002H24RikQ8C8Y3 163 aa8.51□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm9903Q8C9Y8 129 aa8.51□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm16485Q8C4B7 115 aa8.5□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm17606F6ZL36 78 aa8.5□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm10770F7D043 238 aa8.5□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Znf575Q3TXZ1 239 aa8.49□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm43218A0A0G2JGT0 114 aa8.49□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Gm5464Q3UY29 175 aa8.49□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Defb50Q6TU36 73 aa8.48□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Zfp462B1AWL2 2495 aaKnown RBP8.48□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 SrcapA0A087WQ44 3271 aa8.48□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Phxr5P08399 672 aa8.47□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Lrrk2Q5S006 2527 aa8.47□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Ighv8-13A0A075B5Y0 101 aa8.47□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Elof1P60003 83 aa8.47□□□□□ -1.05
Pcdhac1-201ENSMUST00000007584 Rpl37aP61514 92 aa8.46□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Kiaa1549Q68FD9 1940 aa8.45□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Defb1P56386 69 aa8.45□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 1600014C23RikQ9DAX4 101 aa8.44□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 MobpQ9D2P8 170 aa8.44□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 CrygaP04345 174 aa8.44□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Eif4ebp3Q80VV3 101 aa8.44□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Prr9Q8BV84 116 aa8.44□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Lce6aD3YV94 81 aa8.43□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Gm26661M0QWV4 156 aa8.42□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Gm9767G3X930 207 aa8.4□□□□□ -1.06
Pcdhac1-201ENSMUST00000007584 Setd2E9Q5F9 2537 aa8.39□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 Ptpn13Q64512 2453 aa8.39□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 Dmac1Q9CQ00 111 aa8.37□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 RetnlbQ99P86 105 aa8.35□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 Gm10642Q3TWM1 71 aa8.34□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 4930507D05RikQ8C9C9 103 aa8.34□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 Sptbn4E9PX29 2561 aa8.34□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 Pla2g2cP48076 150 aa8.34□□□□□ -1.07
Pcdhac1-201ENSMUST00000007584 Uqcr11Q9CPX8 56 aa8.33□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 1810062G17RikG3X8Y2 129 aa8.32□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Rnase13Q5GAM7 153 aa8.32□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Q8BGJ3 129 aa8.32□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Tns1E9Q0S6 1888 aaKnown RBP8.32□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Gm11627A6PWP4 55 aa8.32□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Q8BT88 171 aa8.32□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Bri3P28662 125 aa8.31□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Nbeal1E9PYP2 2688 aa8.31□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Fam229bQ8CF36 80 aa8.3□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Pcsk5Q04592 1877 aa8.3□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Chd8Q09XV5 2582 aaKnown RBP8.29□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 CnbpP53996 178 aaKnown RBP8.28□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 A330070K13RikQ8CA53 115 aa8.28□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 Dmbt1Q60997 2085 aa8.28□□□□□ -1.08
Pcdhac1-201ENSMUST00000007584 MtorQ9JLN9 2549 aa8.25□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Epg5Q80TA9 2572 aa8.23□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Lrp4Q8VI56 1905 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms