RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Smim1P0C8K7 78 aa5.86□□□□□ -1.47
Trim39-205ENSMUST00000173369 Cmc4Q61908 68 aa5.86□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ryr1E9PZQ0 5035 aa5.86□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ighv1-75A0A075B5Y2 117 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Psmb11Q8BG41 302 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Rnf185Q91YT2 192 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ly6g6cQ9Z1Q4 126 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Trav14n-3A0A075B645 120 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ndufa4l2Q4FZG9 87 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Il1f10Q8R459 152 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Zc2hc1bQ9D534 172 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Dnah7aE9Q0T8 4024 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Stard9Q80TF6 4561 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Sh2d1aO88890 126 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ube2d1P61080 147 aaKnown RBP5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Olfr313Q5NC55 308 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Cfap126Q6P8X9 189 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 Fmc1Q9CR13 113 aa5.85□□□□□ -1.47
Trim39-205ENSMUST00000173369 P01756 117 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Fxyd5P97808 178 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Defa20Q45VN2 95 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Trav7-2Q5R1I3 112 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Gm9918Q8BUR5 174 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Lage3Q9CR70 148 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Cd164Q9R0L9 197 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ryr3A2AGL3 4863 aa5.84□□□□□ -1.47
Trim39-205ENSMUST00000173369 Sertad4A7DTG3 377 aa5.84□□□□□ -1.48
Trim39-205ENSMUST00000173369 Rbmy1bQ60990 380 aa5.84□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ss18Q62280 418 aa5.84□□□□□ -1.48
Trim39-205ENSMUST00000173369 Sec61bQ9CQS8 96 aaKnown RBP5.84□□□□□ -1.48
Trim39-205ENSMUST00000173369 Dkk2Q9QYZ8 259 aa5.84□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ighv1-23A0A0A6YVW3 117 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm45623A0A1B0GSF6 103 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 MifP34884 115 aaKnown RBP5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Tmem170bP86050 132 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Eif4ebp3Q80VV3 101 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Brk1Q91VR8 75 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Cox6cQ9CPQ1 76 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Trav14d-1A0A075B6B1 121 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm20499D3Z4G5 72 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm10647E9Q8X0 124 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 P01791 123 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gpx1P11352 201 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Hist1h4aP62806 103 aaKnown RBP5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm4861Q8C5A4 106 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 Serp1Q9Z1W5 66 aa5.83□□□□□ -1.48
Trim39-205ENSMUST00000173369 P18527 97 aa5.82□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ube2wQ8VDW4 151 aa5.82□□□□□ -1.48
Trim39-205ENSMUST00000173369 Tac4Q99N14 128 aa5.82□□□□□ -1.48
Trim39-205ENSMUST00000173369 PlecQ9QXS1 4691 aaKnown RBP5.82□□□□□ -1.48
Trim39-205ENSMUST00000173369 Trav7d-3Q5R1I1 112 aa5.82□□□□□ -1.48
Trim39-205ENSMUST00000173369 Esp38A8R0X1 80 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 7530416G11RikJ3QJX6 159 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm5629P06327 117 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Spink1P09036 80 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gtsf1lQ9CWD0 151 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Q9D131 166 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Lyzl4Q9D925 145 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm17359A0A0G2JEB7 487 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Sumo2P61957 95 aaKnown RBP5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Igkv4-72A0A0B4J1I4 117 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ndufa1O35683 70 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 PolP10400 120 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 PrcdQ00LT2 53 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Krtap10-4Q08EG8 221 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Defb45Q3V490 66 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gpha2Q925Q5 128 aa5.81□□□□□ -1.48
Trim39-205ENSMUST00000173369 Dnah17Q69Z23 4481 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ighv1-59A0A0A6YXE0 117 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Hbb-b2P02089 147 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Serp2Q6TAW2 65 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 2010109I03RikQ9CQ11 111 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 NpwA0A1L1STR8 176 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm17732E9Q5I2 61 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Prh1P05142 261 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Cops9Q3U898 57 aa5.8□□□□□ -1.48
Trim39-205ENSMUST00000173369 Defa7P50705 93 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 Igkv4-91A0A075B5L2 119 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 GhrhP16043 103 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 Krtap4-1Q3UUY3 169 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 A530064D06RikQ8BNV8 229 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 Tm2d2Q8R0I4 213 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gemin7Q9CWY4 129 aa5.79□□□□□ -1.48
Trim39-205ENSMUST00000173369 OdaphJ3QNT8 126 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm10509O88255 85 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Morn5Q9DAI9 170 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Igkv8-34A0A0G2JDU0 121 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm16181B0V2H2 73 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm9887F6RFI0 207 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Chchd7Q8K2Q5 85 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gpx7Q99LJ6 186 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ighv8-11A0A075B5X4 119 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 2210017I01RikA0A0A6YVV1 95 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Prp2P05143 317 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 7420426K07RikQ3UX66 186 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Defa21Q8C1P2 93 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Gm9936Q8C864 160 aa5.78□□□□□ -1.48
Trim39-205ENSMUST00000173369 Ighv1-66A0A075B5X5 117 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 Trbv16A0A0B4J1H3 115 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 Trav14n-2A0A0G2JDF5 121 aa5.77□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 181.2 ms