RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 4930556J24RikQ9D4U7 146 aa9.23□□□□□ -0.93
Ccdc171-204ENSMUST00000126429 Fat1A0A1L1SQU7 4645 aa9.22□□□□□ -0.93
Ccdc171-204ENSMUST00000126429 Dnah8Q91XQ0 4731 aa9.22□□□□□ -0.93
Ccdc171-204ENSMUST00000126429 P0C913 63 aa9.22□□□□□ -0.93
Ccdc171-204ENSMUST00000126429 Trappc1Q5NCF2 145 aa9.22□□□□□ -0.93
Ccdc171-204ENSMUST00000126429 Bak1O08734 209 aa9.21□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Krtap13O88375 197 aa9.2□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Tspo2Q9CRZ8 162 aa9.2□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Srsf9Q9D0B0 222 aaKnown RBP9.2□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 4930546C10RikE9Q4Y3 121 aa9.19□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Trav9n-4A0A075B631 113 aa9.18□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 A0A1Y7VJ07 166 aa9.18□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Gm10542F6XDR3 90 aa9.18□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Gm10837Q3UTT8 145 aa9.18□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Tmem223Q9CQE2 199 aaKnown RBP9.18□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Pgpep1Q9ESW8 209 aa9.18□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Ighv2-9A0A075B5Q5 116 aa9.17□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Igkv3-12A0A140T8P0 119 aa9.17□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Gm10735Q3US96 136 aa9.17□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Isg15Q64339 161 aaKnown RBP9.17□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Bud31Q6PGH1 103 aa9.17□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Kmt2cQ8BRH4 4903 aa9.17□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Ighv2-9-1A0A075B697 116 aa9.16□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Ndufa12Q7TMF3 145 aaKnown RBP9.16□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Higd1aQ9JLR9 95 aa9.16□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Pkhd1E9PZ36 4059 aa9.16□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 CrxO54751 299 aa9.15□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 CnbpP53996 178 aaKnown RBP9.15□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Ifitm10Q8BR26 201 aa9.15□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Sec11aQ9R0P6 179 aa9.15□□□□□ -0.94
Ccdc171-204ENSMUST00000126429 Trav13d-4A0A0G2JFX3 110 aa9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Hbb-bsA8DUK4 147 aa9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Hbb-b1P02088 147 aa9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Ube2d1P61080 147 aaKnown RBP9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Gm10604Q3V0X7 143 aa9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 3110070M22RikQ9DAQ7 118 aa9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Timm17aQ9Z0V8 171 aa9.14□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 TcraP01849 138 aa9.13□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Gpx1P11352 201 aa9.13□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Sprr1bQ62267 153 aa9.13□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 S100a8P27005 89 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 SpinklQ8CEK3 90 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Igkv4-92A0A0B4J1I2 117 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Tmem238A9JSM3 176 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Ca1P13634 261 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Defa9P50707 93 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Hnrnpa3Q8BG05 379 aaKnown RBP9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Q9DAA3 117 aa9.12□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Trav13-4-dv7A0A075B6C2 110 aa9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Ndufa1O35683 70 aa9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 P01896 185 aa9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Rpl13aP19253 203 aaKnown RBP9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Tmem170bP86050 132 aa9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 4930519P11RikQ9CUJ8 166 aa9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Tax1bp3Q9DBG9 124 aa9.11□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Gm45521A0A1B0GRK0 198 aa9.1□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 AponG3X9D6 251 aa9.1□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Fgf6P21658 208 aa9.1□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Prss58Q8BW11 241 aa9.1□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Ube2wQ8VDW4 151 aa9.1□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 9430069I07RikQ9CX21 111 aa9.1□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Esp24A8R0V6 68 aa9.09□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Fam240aJ3QNP9 97 aa9.09□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 P01794 123 aa9.09□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Defa10P50708 93 aa9.09□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Herc1E9PZP8 4859 aa9.09□□□□□ -0.95
Ccdc171-204ENSMUST00000126429 Gm38119A0A0A6YX29 146 aa9.08□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Igkv2-137A0A0B4J1H6 120 aa9.08□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Vmn1r197Q8R265 298 aa9.08□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Mfap4Q9D1H9 257 aa9.08□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Ankrd39Q9D2X0 183 aa9.08□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 P01837 106 aa9.07□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Tal2Q62282 108 aa9.07□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Tmem97Q8VD00 176 aa9.07□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 HydinQ80W93 5154 aa9.06□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Trav4n-4A0A075B615 110 aa9.06□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 A030014E15RikA0A1Y7VJV2 120 aa9.06□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 P18527 97 aa9.06□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Gnb1lQ9EQ15 326 aa9.06□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Vamp8O70404 101 aa9.05□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Mustn1Q99JI1 82 aa9.05□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 PpdpfQ9CR37 115 aa9.05□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 1700012A03RikQ9DAF1 130 aa9.05□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 ApobE9Q414 4505 aa9.05□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Smr3aQ61900 147 aa9.04□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Gm1553Q66VB7 94 aa9.04□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Brd3osA0A1B0GRB6 84 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 A030005L19RikA0A1Y7VIU2 113 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Gm7544A0A1Y7VJ58 118 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Smim13E9Q942 88 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Cks1brtQ3UNC9 96 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Defa22Q8C1N8 93 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 BC106179Q8C9L1 186 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Gm10295Q8CCF3 114 aa9.03□□□□□ -0.96
Ccdc171-204ENSMUST00000126429 Fam104aA2A6P4 185 aa9.02□□□□□ -0.97
Ccdc171-204ENSMUST00000126429 Sprr1aQ62266 144 aa9.02□□□□□ -0.97
Ccdc171-204ENSMUST00000126429 BB014433Q8C5R5 389 aa9.02□□□□□ -0.97
Ccdc171-204ENSMUST00000126429 Ighv1-56A0A0A6YXG2 117 aa9.01□□□□□ -0.97
Ccdc171-204ENSMUST00000126429 Trav11A0A0B4J1J9 114 aa9.01□□□□□ -0.97
Ccdc171-204ENSMUST00000126429 Smim1P0C8K7 78 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 122.6 ms