RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Fam19a3Q7TPG6 132 aa9.18□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Gm11562A0PK51 136 aa9.17□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 BC025920Q3US60 128 aa9.17□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Gm11733Q8BQP1 125 aa9.17□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Carhsp1Q9CR86 148 aa9.17□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 CrxO54751 299 aa9.16□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Defa13P50711 93 aa9.16□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Pglyrp4Q0VB07 374 aa9.16□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Tmem86bQ497J1 226 aa9.16□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Mrps26Q80ZS3 200 aa9.16□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Ss18l2Q9D174 77 aa9.16□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Defb12Q8K4N3 78 aa9.15□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 Map1lc3aQ91VR7 121 aa9.15□□□□□ -0.94
Sf3b6-201ENSMUST00000046207 A0A1Y7VLE6 161 aa9.14□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Obox2E9PXV9 151 aa9.14□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Med28Q920D3 178 aa9.14□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Rpl36-ps4A0A140T8U4 117 aa9.13□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Rbm7Q9CQT2 265 aaKnown RBP9.13□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Ormdl2Q9CQZ0 153 aa9.13□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 3110070M22RikQ9DAQ7 118 aa9.13□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Zfand2aQ9JII7 171 aa9.13□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Trav11A0A0B4J1J9 114 aa9.12□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Gm45623A0A1B0GSF6 103 aa9.12□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Sertad4A7DTG3 377 aa9.12□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 ErasQ7TN89 227 aa9.12□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Lamtor2Q9JHS3 125 aa9.12□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 C530025M09RikF6RGA8 229 aa9.11□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Cks1bP61025 79 aa9.11□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Gm10842Q3U587 122 aa9.11□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Ndufa5Q9CPP6 116 aa9.11□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Hsbp1Q9CQZ1 76 aa9.11□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Higd1aQ9JLR9 95 aa9.11□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Krtap28-13A0A087WQP5 138 aa9.1□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Ino80eA0A0U1RP99 260 aa9.1□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Prol1E9PYQ4 312 aa9.1□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 CebpgP53568 150 aa9.1□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Bsph2Q0Q236 131 aa9.1□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Sec11aQ9R0P6 179 aa9.1□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Q3UNZ8 350 aa9.09□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 Anapc16Q9CPV2 110 aa9.09□□□□□ -0.95
Sf3b6-201ENSMUST00000046207 SvbpQ99LQ4 66 aa9.08□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Cdip1Q9DB75 208 aa9.08□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Trav14-2A0A075B694 121 aa9.07□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Gm20726G3UX18 150 aa9.07□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Hbb-b2P02089 147 aa9.07□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 MymxQ2Q5T5 84 aa9.07□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Defb39Q70KL3 74 aa9.07□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Fam25cQ8CF02 89 aa9.07□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Trav9d-4A0A0G2JG37 103 aa9.06□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Krtap1-3A2A588 173 aa9.06□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Esp24A8R0V6 68 aa9.06□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Wfdc12Q9JHY3 85 aa9.06□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Timm17aQ9Z0V8 171 aa9.06□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Trav14n-2A0A0G2JDF5 121 aa9.05□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Gm5426J3QNM7 103 aa9.05□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Aqp7O54794 303 aa9.05□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Krtap28-10A0A1Y7VP58 119 aa9.04□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Ccdc179J3QM76 67 aa9.04□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Tmem136Q3TYE7 245 aa9.04□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Plpp2Q9DAX2 276 aa9.04□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Gm10203F6QJ09 66 aa9.03□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Wfdc10Q3V2J9 124 aa9.03□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Bean1Q9EQG5 255 aa9.03□□□□□ -0.96
Sf3b6-201ENSMUST00000046207 Trav8-1A0A075B641 109 aa9.02□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 A030005K14RikA0A1Y7VNY1 122 aa9.02□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Ctdsp1P58466 261 aa9.02□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Rpl18aP62717 176 aaKnown RBP9.02□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Uqcr10Q8R1I1 64 aa9.02□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Tspo2Q9CRZ8 162 aa9.02□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Gm45521A0A1B0GRK0 198 aa9.01□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Gm5965D3Z724 196 aa9.01□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Ighv1-62-1A0A075B5U3 116 aa9□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Igkv3-7A0A0G2JE31 119 aa9□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Igkv8-16A0A0G2JDG9 121 aa8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Tmem238lA0A1B0GS74 79 aa8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Gm7102J3QQ10 178 aa8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Ndufb11O09111 151 aa8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Josd1Q9DBJ6 202 aa8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 MNCb-2875Q9DCB3 74 aa8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Mrpl32Q9DCI9 187 aaKnown RBP8.99□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 S100a1P56565 94 aa8.98□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 P84750 121 aa8.98□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 BC106179Q8C9L1 186 aa8.98□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Ankrd39Q9D2X0 183 aa8.98□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Ceacam12Q3UKP4 300 aa8.97□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Defb50Q6TU36 73 aa8.97□□□□□ -0.97
Sf3b6-201ENSMUST00000046207 Cdk2ap2Q9CPY4 127 aa8.96□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Pttg1Q9CQJ7 199 aa8.96□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Q9CRC3 126 aa8.96□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Tagln2Q9WVA4 199 aaKnown RBP8.96□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Gm867A0A1W2P7T4 151 aa8.95□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 P01755 137 aa8.95□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Defa4P28311 92 aa8.95□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Zfp930A0A1D5RM15 441 aa8.94□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Cystm1Q8K353 104 aa8.94□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Anapc11Q9CPX9 84 aa8.94□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Bola1Q9D8S9 137 aaKnown RBP8.94□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Sec11cQ9D8V7 192 aa8.94□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Igkv2-137A0A0B4J1H6 120 aa8.93□□□□□ -0.98
Sf3b6-201ENSMUST00000046207 Gm27235Q3UW50 83 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms