RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 4930415O20RikQ8CDT5 131 aa11.31□□□□□ -0.6
Upf1-202ENSMUST00000215817 Fam241bQ9D882 120 aa11.31□□□□□ -0.6
Upf1-202ENSMUST00000215817 Akap9Q70FJ1 3797 aa11.31□□□□□ -0.6
Upf1-202ENSMUST00000215817 Igfn1Q3KNY0 2849 aa11.31□□□□□ -0.6
Upf1-202ENSMUST00000215817 Arhgap32Q811P8 2089 aa11.3□□□□□ -0.6
Upf1-202ENSMUST00000215817 Atp6v0e2Q91XE7 81 aa11.3□□□□□ -0.6
Upf1-202ENSMUST00000215817 Pglyrp1O88593 182 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 Sh2d1aO88890 126 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 Olfr313Q5NC55 308 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 CdsnQ7TPC1 561 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 C920008G01RikA0A0B4J1N1 112 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 CrygdP04342 174 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 Rpl32P62911 135 aaKnown RBP11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 CrygeQ03740 174 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 Atp5eP56382 52 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 A530064D06RikQ8BNV8 229 aa11.29□□□□□ -0.6
Upf1-202ENSMUST00000215817 Gm1968Q3T9I3 115 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 CtrlQ9ER05 264 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 Igkv4-62A0A0G2JDW9 117 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 C1qcQ02105 246 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 Lgals4Q8K419 326 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 Ndufa4l2Q4FZG9 87 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 Cd164l2Q9D6W7 172 aa11.28□□□□□ -0.6
Upf1-202ENSMUST00000215817 Cox17P56394 63 aa11.27□□□□□ -0.61
Upf1-202ENSMUST00000215817 Pfn2Q9JJV2 140 aa11.27□□□□□ -0.61
Upf1-202ENSMUST00000215817 Igkv8-24A0A140T8P5 121 aa11.27□□□□□ -0.61
Upf1-202ENSMUST00000215817 7420426K07RikQ3UX66 186 aa11.27□□□□□ -0.61
Upf1-202ENSMUST00000215817 Tmem86bQ497J1 226 aa11.27□□□□□ -0.61
Upf1-202ENSMUST00000215817 Cfap126Q6P8X9 189 aa11.27□□□□□ -0.61
Upf1-202ENSMUST00000215817 Igkv4-68A0A0B4J1I7 117 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Q9DAQ5 155 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Ighv1-63A0A075B5X2 117 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Trbv16A0A0B4J1H3 115 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Foxi2Q3I5G5 311 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Klk5Q9D140 293 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Ubl5Q9EPV8 73 aa11.26□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm10251J3QPM5 127 aa11.25□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm9922Q8C3P1 144 aa11.25□□□□□ -0.61
Upf1-202ENSMUST00000215817 Cox8cA6H666 72 aa11.25□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm42674D3YUT9 64 aa11.25□□□□□ -0.61
Upf1-202ENSMUST00000215817 Q9D131 166 aa11.25□□□□□ -0.61
Upf1-202ENSMUST00000215817 Znf580Q9DB38 172 aa11.25□□□□□ -0.61
Upf1-202ENSMUST00000215817 Ndufa1O35683 70 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 LeprotO89013 131 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Reg3bP35230 175 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Rpl39P62892 51 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Rmi2Q3UPE3 149 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Defb29Q8BGW9 78 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Pla2g2eQ9QUL3 142 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm20730A0A075B5J6 119 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Egr2P08152 470 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Defb42Q8BVB5 75 aa11.24□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm10647E9Q8X0 124 aa11.23□□□□□ -0.61
Upf1-202ENSMUST00000215817 Pkd1l1Q8R526 2615 aa11.23□□□□□ -0.61
Upf1-202ENSMUST00000215817 Trav13n-1A0A0G2JEU8 110 aa11.23□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm5468Q8C3D3 155 aa11.23□□□□□ -0.61
Upf1-202ENSMUST00000215817 Trav4d-3A0A075B625 110 aa11.22□□□□□ -0.61
Upf1-202ENSMUST00000215817 Tmem213Q08EA8 116 aa11.22□□□□□ -0.61
Upf1-202ENSMUST00000215817 Ighv1-75A0A075B5Y2 117 aa11.22□□□□□ -0.61
Upf1-202ENSMUST00000215817 Fgf6P21658 208 aa11.21□□□□□ -0.61
Upf1-202ENSMUST00000215817 Gm44965A0A0N4SVR3 59 aa11.21□□□□□ -0.61
Upf1-202ENSMUST00000215817 Ighv8-12A0A0G2JDE1 119 aa11.21□□□□□ -0.62
Upf1-202ENSMUST00000215817 Lamtor3O88653 124 aa11.21□□□□□ -0.62
Upf1-202ENSMUST00000215817 Igf1P05017 153 aa11.2□□□□□ -0.62
Upf1-202ENSMUST00000215817 Tmem258P61166 79 aa11.2□□□□□ -0.62
Upf1-202ENSMUST00000215817 Fxyd5P97808 178 aa11.2□□□□□ -0.62
Upf1-202ENSMUST00000215817 Chd9Q8BYH8 2885 aa11.2□□□□□ -0.62
Upf1-202ENSMUST00000215817 Cdk2ap2Q9CPY4 127 aa11.2□□□□□ -0.62
Upf1-202ENSMUST00000215817 B430305J03RikQ8BQQ8 176 aa11.19□□□□□ -0.62
Upf1-202ENSMUST00000215817 Zfhx4Q9JJN2 3550 aa11.19□□□□□ -0.62
Upf1-202ENSMUST00000215817 Wfdc15aQ8BH89 80 aa11.19□□□□□ -0.62
Upf1-202ENSMUST00000215817 Vsig4F6TUL9 280 aa11.19□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm10490F6VBM2 120 aa11.18□□□□□ -0.62
Upf1-202ENSMUST00000215817 P01837 106 aa11.18□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm4861Q8C5A4 106 aa11.18□□□□□ -0.62
Upf1-202ENSMUST00000215817 Wdr38Q9D994 303 aa11.18□□□□□ -0.62
Upf1-202ENSMUST00000215817 Fam19a4Q7TPG5 135 aa11.18□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm9936Q8C864 160 aa11.18□□□□□ -0.62
Upf1-202ENSMUST00000215817 D730001G18RikA0A087WQU7 115 aa11.17□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm26661M0QWV4 156 aa11.17□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gata1P17679 413 aa11.17□□□□□ -0.62
Upf1-202ENSMUST00000215817 4930564D02RikQ9D4S4 103 aa11.17□□□□□ -0.62
Upf1-202ENSMUST00000215817 TshbP12656 138 aa11.17□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm11565A2A4M7 156 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 Spata3Q9D9T6 193 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm21748Q3UE70 102 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 Ighv2-6A0A075B6A7 116 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 9430069I07RikQ9CX21 111 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 Ighv1-85A0A075B5Y6 117 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 SelenowP63300 88 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 Shisa2Q8QZV2 295 aa11.16□□□□□ -0.62
Upf1-202ENSMUST00000215817 Igkv4-69A0A0B4J1I6 116 aa11.15□□□□□ -0.62
Upf1-202ENSMUST00000215817 Glrp1E9Q9S8 174 aa11.15□□□□□ -0.62
Upf1-202ENSMUST00000215817 Ndufa12Q7TMF3 145 aaKnown RBP11.15□□□□□ -0.62
Upf1-202ENSMUST00000215817 Gm10295Q8CCF3 114 aa11.15□□□□□ -0.62
Upf1-202ENSMUST00000215817 4930442H23RikQ9D5G7 103 aa11.15□□□□□ -0.63
Upf1-202ENSMUST00000215817 Dmbt1Q60997 2085 aa11.15□□□□□ -0.63
Upf1-202ENSMUST00000215817 E130218I03RikA0A0U1RNU5 63 aa11.14□□□□□ -0.63
Upf1-202ENSMUST00000215817 Trav9d-4A0A0G2JG37 103 aa11.14□□□□□ -0.63
Upf1-202ENSMUST00000215817 U90926O08546 118 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 178.6 ms