RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Cks1bP61025 79 aa12.08□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Plac8l1Q08EJ0 177 aa12.08□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Smrp1Q2MH31 260 aa12.08□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Ube2wQ8VDW4 151 aa12.08□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Gm7849D3YX03 116 aa12.07□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Chd6A3KFM7 2711 aa12.07□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Tfpi2O35536 230 aa12.07□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Gm10577Q3UDV9 132 aa12.07□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Bahcc1Q3UHR0 2643 aa12.06□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Gm10542F6XDR3 90 aa12.06□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Nop10Q9CQS2 64 aa12.06□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Zc2hc1bQ9D534 172 aa12.06□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Dmbt1Q60997 2085 aa12.06□□□□□ -0.48
Rpf1-203ENSMUST00000199079 4930546C10RikE9Q4Y3 121 aa12.05□□□□□ -0.48
Rpf1-203ENSMUST00000199079 P01729 129 aa12.05□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Ankrd17Q99NH0 2603 aaKnown RBP12.05□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Anapc13Q8R034 74 aa12.05□□□□□ -0.48
Rpf1-203ENSMUST00000199079 FlncQ8VHX6 2726 aaKnown RBP12.05□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Mapk1ip1lQ8BH93 242 aa12.03□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Lyrm7Q9DA03 104 aa12.03□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Nav3Q80TN7 2359 aa12.03□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Defb26Q30KN7 186 aa12.03□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Cd99Q8VCN6 175 aa12.03□□□□□ -0.48
Rpf1-203ENSMUST00000199079 BC067074F6RXI4 2391 aa12.02□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Celsr2Q9R0M0 2920 aa12.02□□□□□ -0.48
Rpf1-203ENSMUST00000199079 Phpt1Q9DAK9 124 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Tenm4Q3UHK6 2771 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Arid1bE9Q4N7 2244 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm43218A0A0G2JGT0 114 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 GfyJ3KML8 504 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Atp5g3P56384 141 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gpha2Q925Q5 128 aa12.01□□□□□ -0.49
Rpf1-203ENSMUST00000199079 P01745 121 aa12□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Lage3Q9CR70 148 aa12□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm10300Q8C8P7 189 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Sostdc1Q9CQN4 206 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Trav13n-1A0A0G2JEU8 110 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm10772F7AIG4 85 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Spink1P09036 80 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Ndufa3Q9CQ91 84 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Crlf1Q9JM58 425 aa11.99□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Trav7-6A0A075B640 112 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm11020F6ZGD5 61 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Eif4ebp3Q80VV3 101 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Ly6hQ9WUC3 139 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm9513B3GLJ6 99 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Lst1O08843 95 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Ppp1r32Q148A4 427 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Ss18l2Q9D174 77 aa11.98□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Trav9d-3A0A075B695 113 aa11.97□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Igkv4-72A0A0B4J1I4 117 aa11.97□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Rpl35aO55142 110 aa11.97□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm10549Q3URY4 149 aa11.97□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Xlr5cQ9JJR2 179 aa11.97□□□□□ -0.49
Rpf1-203ENSMUST00000199079 Gm10767Q3TQP0 103 aa11.96□□□□□ -0.49
Rpf1-203ENSMUST00000199079 MobpQ9D2P8 170 aa11.96□□□□□ -0.49
Rpf1-203ENSMUST00000199079 1700011M02RikB1AX35 88 aa11.96□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Ighv1-49A0A0A6YWX2 117 aa11.95□□□□□ -0.5
Rpf1-203ENSMUST00000199079 MalO09198 153 aa11.95□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Atp5eP56382 52 aa11.95□□□□□ -0.5
Rpf1-203ENSMUST00000199079 SpinklQ8CEK3 90 aa11.95□□□□□ -0.5
Rpf1-203ENSMUST00000199079 2310009B15RikA0A0A6YWI4 143 aa11.94□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Zfand2aQ9JII7 171 aa11.94□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Spink4O35679 86 aa11.93□□□□□ -0.5
Rpf1-203ENSMUST00000199079 PemtQ61907 199 aa11.93□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Psors1c2Q80ZC9 134 aa11.93□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Wdr38Q9D994 303 aa11.92□□□□□ -0.5
Rpf1-203ENSMUST00000199079 SelenowP63300 88 aa11.92□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Trav11A0A0B4J1J9 114 aa11.91□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Ly6c2P0CW03 131 aa11.91□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Cox7a1P56392 80 aa11.91□□□□□ -0.5
Rpf1-203ENSMUST00000199079 RetnQ99P87 114 aa11.91□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Znf414Q9DCK4 299 aa11.9□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Muc4Q8JZM8 3443 aa11.9□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Rpl28P41105 137 aaKnown RBP11.9□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Gm4861Q8C5A4 106 aa11.9□□□□□ -0.5
Rpf1-203ENSMUST00000199079 Krtap16-1A2A5X5 502 aa11.89□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Defb50Q6TU36 73 aa11.89□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Ighv2-9-1A0A075B697 116 aa11.88□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Trav9d-4A0A0G2JG37 103 aa11.88□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Trav13-4-dv7A0A075B6C2 110 aa11.88□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Nhlrc1Q8BR37 401 aa11.88□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Tm2d2Q8R0I4 213 aa11.88□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Notch3Q61982 2318 aa11.87□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Erdr1J3QMM0 206 aa11.87□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Atp5g1Q9CR84 136 aa11.87□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Zfp951A0A087WRH0 451 aa11.87□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Acyp1P56376 99 aa11.87□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Ank2Q8C8R3 3898 aa11.86□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Tmem223Q9CQE2 199 aaKnown RBP11.86□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Pla2g1bQ9Z0Y2 146 aa11.86□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Gm9767G3X930 207 aa11.85□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Sprr1bQ62267 153 aa11.85□□□□□ -0.51
Rpf1-203ENSMUST00000199079 TeppQ6IMH0 216 aa11.85□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Klk9Q32M27 251 aa11.84□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Odf3l2Q3TZ65 277 aa11.84□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Vmo1Q5SXG7 201 aa11.84□□□□□ -0.51
Rpf1-203ENSMUST00000199079 4930544G11RikQ9CR99 193 aa11.84□□□□□ -0.51
Rpf1-203ENSMUST00000199079 Sh2d1aO88890 126 aa11.83□□□□□ -0.52
Rpf1-203ENSMUST00000199079 Cmc4Q61908 68 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms