RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Tspan13Q9D8C2 204 aa5.35□□□□□ -1.55
Usp40-204ENSMUST00000187758 Ndufa3Q9CQ91 84 aa5.35□□□□□ -1.55
Usp40-204ENSMUST00000187758 Plac1Q9JI83 173 aa5.35□□□□□ -1.55
Usp40-204ENSMUST00000187758 P01745 121 aa5.34□□□□□ -1.55
Usp40-204ENSMUST00000187758 Gm1968Q3T9I3 115 aa5.34□□□□□ -1.55
Usp40-204ENSMUST00000187758 Dad1P61804 113 aa5.34□□□□□ -1.55
Usp40-204ENSMUST00000187758 Gemin7Q9CWY4 129 aa5.34□□□□□ -1.55
Usp40-204ENSMUST00000187758 Pradc1Q9D9N8 188 aa5.34□□□□□ -1.55
Usp40-204ENSMUST00000187758 Ndufa1O35683 70 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gata1P17679 413 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Trav9d-3A0A075B695 113 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Defa1P11477 93 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm7137J3QMW1 236 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 OdaphJ3QNT8 126 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ppp1r32Q148A4 427 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Q5BN45 167 aa5.33□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm9887F6RFI0 207 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 P01794 123 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Atp5eP56382 52 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Rpl39P62892 51 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Trav13d-1A0A075B606 110 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Trav3-4A0A075B654 114 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm11444F6QMA6 170 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Higd2aQ9CQJ1 106 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Cdip1Q9DB75 208 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Dpm2Q9Z324 84 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 ApcQ61315 2845 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Foxc1Q61572 553 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ifitm10Q8BR26 201 aa5.32□□□□□ -1.56
Usp40-204ENSMUST00000187758 Brd3osA0A1B0GRB6 84 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ighv1-59A0A0A6YXE0 117 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gpha2Q925Q5 128 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ifitm1Q9D103 106 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Phxr5P08399 672 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Spink1P09036 80 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Il1f10Q8R459 152 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 F11rO88792 300 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Atp5g3P56384 141 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Cox7a1P56392 80 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm904Q3V2L5 102 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Mustn1Q99JI1 82 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Atp5g1Q9CR84 136 aa5.31□□□□□ -1.56
Usp40-204ENSMUST00000187758 Igkv4-72A0A0B4J1I4 117 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Smr3aQ61900 147 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Higd1aQ9JLR9 95 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm17472A0A075B683 117 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ighv1-49A0A0A6YWX2 117 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Igkv4-54A0A0G2JES9 117 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 CckP09240 115 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ube2d3P61079 147 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ube2d2P62838 147 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Dmrt3Q80WT2 476 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 6430550D23RikE9Q1X6 194 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Defa16P50714 93 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 D130052B06RikQ3UW13 202 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Prr13Q9CQJ5 137 aa5.3□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm3618D3Z4P5 127 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm2916Q9D9B9 127 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 FcorP0DJI6 106 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Klk9Q32M27 251 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Spink13Q3UTS8 97 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Trav4n-4A0A075B615 110 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm10322F7D7I4 111 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 BC025920Q3US60 128 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm10295Q8CCF3 114 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Cox6cQ9CPQ1 76 aa5.29□□□□□ -1.56
Usp40-204ENSMUST00000187758 Gm9513B3GLJ6 99 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Smim1P0C8K7 78 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Vmo1Q5SXG7 201 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Lgals4Q8K419 326 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ube2wQ8VDW4 151 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ighv8-5A0A0A6YY60 119 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Spink4O35679 86 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 P01811 117 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Rpl32-psP17932 135 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Eif4ebp1Q60876 117 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Timm17aQ9Z0V8 171 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Notch1Q01705 2531 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Klk5Q9D140 293 aa5.28□□□□□ -1.56
Usp40-204ENSMUST00000187758 Ighv1-11A0A0A6YWI9 117 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 Sslp1Q3UN54 99 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 Fam19a4Q7TPG5 135 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 PrcdQ00LT2 53 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 Igkv4-78A0A0A6YYE5 119 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 P01837 106 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 BC106179Q8C9L1 186 aa5.27□□□□□ -1.57
Usp40-204ENSMUST00000187758 Gm6793B2RXM2 351 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Igkv2-137A0A0B4J1H6 120 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Igkv4-61A0A0G2JH00 117 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 P01729 129 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Ly6gP35461 111 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Gm21748Q3UE70 102 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Gm4707V9GXN5 68 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Sh2d1aO88890 126 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 P18527 97 aa5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Hspg2Q05793 3707 aaKnown RBP5.26□□□□□ -1.57
Usp40-204ENSMUST00000187758 Gm44965A0A0N4SVR3 59 aa5.25□□□□□ -1.57
Usp40-204ENSMUST00000187758 Gm10767Q3TQP0 103 aa5.25□□□□□ -1.57
Usp40-204ENSMUST00000187758 Defa25Q5G864 92 aa5.25□□□□□ -1.57
Usp40-204ENSMUST00000187758 Trav13n-1A0A0G2JEU8 110 aa5.25□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 246.4 ms