RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Pcnx1Q9QYC1 2344 aa5.76□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 AcanQ61282 2132 aaKnown RBP5.76□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Znf414Q9DCK4 299 aa5.75□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Sprr3O09116 238 aa5.75□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 TncQ80YX1 2110 aa5.75□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Gm27027S4R1M6 97 aa5.75□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 P04945 108 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 C1qcQ02105 246 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Crip1P63254 77 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Hist3h2bbQ8CGP0 126 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Hist3h2baQ9D2U9 126 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Arid1bE9Q4N7 2244 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Sbf2E9PXF8 1872 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 1700010B08RikQ9DAI7 102 aa5.74□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Ttc6G3UYY4 1857 aa5.73□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Q8BGJ3 129 aa5.73□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Als2Q920R0 1651 aa5.73□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 E130116L18RikQ8BMV6 101 aa5.73□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Trbv16A0A0B4J1H3 115 aa5.73□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Gm9958Q8C9U4 106 aa5.73□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Cox6a2P43023 97 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Tomm6Q9CQN3 74 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 4930556J24RikQ9D4U7 146 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Cep295Q8BQ48 2412 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Pmaip1Q9JM54 103 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Zgrf1Q0VGT4 1863 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Sipa1l1Q8C0T5 1782 aa5.72□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Tax1bp3Q9DBG9 124 aa5.71□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Atox1O08997 68 aaKnown RBP5.71□□□□□ -1.49
Rc3h1-202ENSMUST00000161609 Anapc11Q9CPX9 84 aa5.71□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Dopey1Q8BL99 2399 aa5.71□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Ifitm6A0A1B0GS75 124 aa5.71□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Mapk1ip1Q9D7G9 263 aa5.71□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Wdr38Q9D994 303 aa5.71□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Tnfrsf13bQ9ET35 249 aa5.71□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Bdp1Q571C7 2467 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Pcp4P63054 62 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 2310009B15RikA0A0A6YWI4 143 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 P18527 97 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 A930002H24RikQ8C8Y3 163 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Pcnx3Q8VI59 2028 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 6430550D23RikE9Q1X6 194 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Chtf8P0CG14 533 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Notch3Q61982 2318 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Gm45213A0A0U1RNZ6 101 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Zfand2aQ9JII7 171 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 SrarpQ3ULG3 163 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Gm5153P01627 120 aa5.7□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 1110002E22RikE0CYV9 1786 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Notch4P31695 1964 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Ighv1-76A0A0G2JFE9 117 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 4930442H23RikQ9D5G7 103 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Gm10322F7D7I4 111 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Brca1P48754 1812 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Reg3aO09037 175 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Iglc1A0A0G2JE99 106 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 P01843 105 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Limd2Q8BGB5 128 aa5.69□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Nlrc5C3VPR6 1915 aa5.68□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 1700018G05RikA0A1B0GSI2 66 aa5.68□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Spg11Q3UHA3 2430 aa5.68□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Sec16aA2AIX1 2377 aa5.68□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Mp68P56379 58 aa5.67□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 CenpeQ6RT24 2474 aaKnown RBP5.67□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Thsd7bQ6P4U0 1607 aa5.67□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Gm26661M0QWV4 156 aa5.67□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 HelzQ6DFV5 1964 aaKnown RBP5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Col18a1P39061 1774 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Prrc2aQ7TSC1 2158 aaKnown RBP5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Q9D131 166 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 CenpwQ3URR0 86 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Q9DAQ5 155 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Defb42Q8BVB5 75 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Q9DAB9 146 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Cox8cA6H666 72 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Cdkn2aQ64364 169 aa5.66□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Gm20538F6Z9R1 75 aa5.65□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Trav4n-4A0A075B615 110 aa5.65□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Tnrc6aQ3UHK8 1896 aaKnown RBP5.65□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Plxna4Q80UG2 1893 aa5.65□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Zfand3Q497H0 227 aa5.65□□□□□ -1.5
Rc3h1-202ENSMUST00000161609 Gm16223Q8CBM3 117 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Ramp1Q9WTJ5 148 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm27235Q3UW50 83 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Triap1Q9D8Z2 76 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm28230A0A0A0MQ91 144 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Plac8Q9JI48 112 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Q91WE4 72 aa5.65□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Smim6Q3U0I6 56 aa5.64□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Pou2af1Q64693 256 aa5.64□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm10490F6VBM2 120 aa5.64□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 BC025920Q3US60 128 aa5.64□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Cd164l2Q9D6W7 172 aa5.64□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Ncoa6Q9JL19 2067 aa5.64□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 FcorP0DJI6 106 aa5.63□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 MobpQ9D2P8 170 aa5.63□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 TroQ6DIC6 2087 aa5.63□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Plxna3P70208 1872 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm9508A0A1W2P7W0 230 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Q8K1L6 76 aa5.62□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 91.2 ms