RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Bin3Q9JI08 253 aa2.59□□□□□ -1.99
Hmgb1-203ENSMUST00000110505 Prss1Q9Z1R9 246 aa2.59□□□□□ -1.99
Hmgb1-203ENSMUST00000110505 Tsc22d3Q9Z2S7 137 aa2.59□□□□□ -1.99
Hmgb1-203ENSMUST00000110505 Ighv1-66A0A075B5X5 117 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav4-2A0A075B638 110 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Spi1P17433 272 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Igll1P20764 209 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Olfr1537P34983 314 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Hspe1Q64433 102 aaKnown RBP2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Cfap126Q6P8X9 189 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Olfr1381Q7TQT4 311 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Smim8Q9CQQ0 97 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 9430069I07RikQ9CX21 111 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Mrpl55Q9CZ83 127 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Nat8Q9JIY7 227 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Timm17aQ9Z0V8 171 aa2.59□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trbv16A0A0B4J1H3 115 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm43218A0A0G2JGT0 114 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm11213A0A1B0GR83 88 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm4559A4IF42 199 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm21616B6ZB74 166 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm17732E9Q5I2 61 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm28044L7N1X0 119 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ighv1-61P01749 117 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ube2g1P62254 170 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Rpl23P62830 140 aaKnown RBP2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Tmem167bQ80X45 74 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 A330070K13RikQ8CA53 115 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Cox19Q8K0C8 92 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Asb13Q8VBX0 278 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 SycnQ8VCK7 134 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Rab4bQ91ZR1 213 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 1700010B08RikQ9DAI7 102 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Phlda3Q9WV95 125 aa2.58□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ighv1-15A0A0A6YXA5 117 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 OdaphJ3QNT8 126 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gon7P0C8B4 98 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 Plac8l1Q08EJ0 177 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 1500011B03RikQ3TTH7 73 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 Odf3l2Q3TZ65 277 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 Tnfsf18Q7TS55 173 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 Derl1Q99J56 251 aa2.57□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm28845A0A087WR76 214 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 E130218I03RikA0A0U1RNU5 63 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ctxnd1A0A1B0GST9 59 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Olfr913E9Q716 312 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 TcraP01849 138 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 PkiaP63248 76 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Cd300lbQ3U497 209 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm12888Q3UW77 119 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Pmis2Q497Q9 96 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ndufa12Q7TMF3 145 aaKnown RBP2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 4930544G11RikQ9CR99 193 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ly6hQ9WUC3 139 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ube2aQ9Z255 152 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 SnapinQ9Z266 136 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Fat4Q2PZL6 4981 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Igkv8-16A0A0G2JDG9 121 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Igkv6-13A0A0G2JGY3 119 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Nat8b-psE0CYC6 232 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Olfr218E9PWV2 313 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm20538F6Z9R1 75 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm15056F6ZR08 88 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm2310J3QNJ2 377 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Cox17P56394 63 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 P58686 83 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Serf2P84102 59 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Defb9Q8R2I6 67 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Map1lc3bQ9CQV6 125 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Pfdn1Q9CWM4 122 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 PmvkQ9D1G2 192 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Shisal2bQ9D1Y9 158 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ramp1Q9WTJ5 148 aa2.56□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm4064A0A087WR82 380 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav3n-3A0A0G2JEM0 114 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 A0A1Y7VMQ4 148 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm6970F7DCP6 221 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 CrygaP04345 174 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Rab19P35294 217 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Q8CF25 301 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Tmem242Q8VCR3 140 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Batf3Q9D275 118 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ube2l6Q9QZU9 153 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 EsdQ9R0P3 282 aa2.55□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav9n-4A0A075B631 113 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav7-6A0A075B640 112 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 D830044I16RikA0A1D5RM53 117 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 H2al2bA9Z055 111 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm21693J3QK27 380 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 S100a10P08207 97 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 NfyaP23708 346 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Cd24P24807 76 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Q24JP4 165 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ndufa4l2Q4FZG9 87 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Sft2d1Q5SSN7 159 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Smr3aQ61900 147 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Q8C4X7 151 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Tceal8Q9CZY2 117 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 ShpkQ9D5J6 476 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 ZanO88799 5376 aa2.54□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms