RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Smim10l1A0A087WNQ7 89 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Trav4-3A0A0B4J1K1 110 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Trav7d-3Q5R1I1 112 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 4930415O20RikQ8CDT5 131 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Ighv1-62-1A0A075B5U3 116 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 P01729 129 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 A730071L15RikQ8C4X0 137 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 RetnQ99P87 114 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Sptbn4E9PX29 2561 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Trav6-4A0A075B6B4 115 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Gm35549A0A0N4SUS7 141 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Fam240aJ3QNP9 97 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Atp5lQ9CPQ8 103 aa5.68□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Sptan1P16546 2472 aaKnown RBP5.67□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Trav4d-3A0A075B625 110 aa5.67□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Gm10549Q3URY4 149 aa5.67□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Lrrk2Q5S006 2527 aa5.67□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 ApcQ61315 2845 aa5.67□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Igkv4-72A0A0B4J1I4 117 aa5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 P04219 140 aa5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Foxc1Q61572 553 aa5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 MobpQ9D2P8 170 aa5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Usp9xP70398 2559 aaKnown RBP5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Higd1aQ9JLR9 95 aa5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Usp24B1AY13 2617 aaKnown RBP5.66□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Gm10542F6XDR3 90 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Ighv1-61P01749 117 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 CnbpP53996 178 aaKnown RBP5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Cdc42se2Q8BGH7 84 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Ube2wQ8VDW4 151 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Trav14d-3-dv8A0A075B619 120 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Gm10036E9PYL9 178 aaKnown RBP5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Gm10577Q3UDV9 132 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 Sprr1bQ62267 153 aa5.65□□□□□ -1.5
Pcdh9-201ENSMUST00000068992 5730596B20RikQ8BQ08 205 aa5.65□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm933J3QPC1 141 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 4930518I15RikQ3V2W7 57 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Hes7Q8BKT2 225 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 4930524J08RikQ9CUJ5 163 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 4930470P17RikQ9D542 155 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm29666A0A087WQ99 126 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm10647E9Q8X0 124 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ntn5Q3UQ22 452 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Col6a4A2AX52 2309 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 FlnbQ80X90 2602 aaKnown RBP5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Scgb1b24B1B0N6 92 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm17732E9Q5I2 61 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 GfyJ3KML8 504 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Rpl28P41105 137 aaKnown RBP5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Qrich2A0A140LIY9 2337 aa5.64□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Hectd1Q69ZR2 2618 aaKnown RBP5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm3618D3Z4P5 127 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ly86O88188 162 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 BC106179Q8C9L1 186 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm2916Q9D9B9 127 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 VwfQ8CIZ8 2813 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 PlecQ9QXS1 4691 aaKnown RBP5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Zfp951A0A087WRH0 451 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Synj2bpQ9D6K5 145 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Spata25Q9DA57 226 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Zfand2aQ9JII7 171 aa5.63□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 1700010B08RikQ9DAI7 102 aa5.62□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Notch3Q61982 2318 aa5.62□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Trav13n-1A0A0G2JEU8 110 aa5.62□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ighv1-56A0A0A6YXG2 117 aa5.62□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Tcf15Q60756 195 aa5.62□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ighv2-9A0A075B5Q5 116 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm867A0A1W2P7T4 151 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 NrgnP60761 78 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Atp5g1Q9CR84 136 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ighv8-11A0A075B5X4 119 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Usmg5Q78IK2 58 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Rnf183Q8QZS5 190 aa5.61□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Q9DAA7 145 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm29423A0A087WRM1 55 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Igkv4-53A0A0G2JFC6 119 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ankrd17Q99NH0 2603 aaKnown RBP5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 ApobE9Q414 4505 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Igkv8-21A0A140T8P7 120 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Defb33Q30KN3 62 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 4930535I16RikQ9CUI2 172 aa5.6□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ppp1r32Q148A4 427 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Odf3l2Q3TZ65 277 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 AcacbE9Q4Z2 2448 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Spta1P08032 2415 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Fxyd5P97808 178 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Gm10767Q3TQP0 103 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Ifitm10Q8BR26 201 aa5.59□□□□□ -1.51
Pcdh9-201ENSMUST00000068992 Sh2d1aO88890 126 aa5.59□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Ins2P01326 110 aa5.59□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Defb42Q8BVB5 75 aa5.59□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 GalmQ8K157 342 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Ss18l2Q9D174 77 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Myo9aQ8C170 2542 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Cox17P56394 63 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 OtoglF7A4A7 2325 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Igkv1-110A0A0B4J1I0 119 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Igkv1-99F6XWB2 120 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Gm8439G3UWA7 96 aa5.58□□□□□ -1.52
Pcdh9-201ENSMUST00000068992 Gm37988J3QM41 62 aa5.58□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms