RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Spink1P09036 80 aa9.63□□□□□ -0.87
Nup88-201ENSMUST00000035283 Trbv30A0A0B4J1P1 111 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 Gm867A0A1W2P7T4 151 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 P01729 129 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 Defa1P11477 93 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 Mzt1Q8BUR9 78 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 BC067074F6RXI4 2391 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 Gm7849D3YX03 116 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 ColqO35348 457 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 Cd164l2Q9D6W7 172 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 CubnQ9JLB4 3623 aa9.62□□□□□ -0.87
Nup88-201ENSMUST00000035283 SbsponQ3UPR9 264 aa9.61□□□□□ -0.87
Nup88-201ENSMUST00000035283 Ucn2Q99ML8 113 aa9.61□□□□□ -0.87
Nup88-201ENSMUST00000035283 Ighv1-62-1A0A075B5U3 116 aa9.61□□□□□ -0.87
Nup88-201ENSMUST00000035283 SmcpP15265 143 aa9.61□□□□□ -0.87
Nup88-201ENSMUST00000035283 Xirp2Q4U4S6 3784 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Trav14d-3-dv8A0A075B619 120 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Gm17472A0A075B683 117 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Ss18l2Q9D174 77 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 1700011M02RikB1AX35 88 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Ighv1-61P01749 117 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 SelenowP63300 88 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Avpi1Q9D7H4 142 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Hivep2Q3UHF7 2430 aa9.6□□□□□ -0.87
Nup88-201ENSMUST00000035283 Lst1O08843 95 aa9.59□□□□□ -0.87
Nup88-201ENSMUST00000035283 Gm3443F7CCV5 94 aa9.59□□□□□ -0.87
Nup88-201ENSMUST00000035283 P01745 121 aa9.58□□□□□ -0.88
Nup88-201ENSMUST00000035283 Trav9d-4A0A0G2JG37 103 aa9.58□□□□□ -0.88
Nup88-201ENSMUST00000035283 Tfpi2O35536 230 aa9.58□□□□□ -0.88
Nup88-201ENSMUST00000035283 Fxyd5P97808 178 aa9.57□□□□□ -0.88
Nup88-201ENSMUST00000035283 Apoc4Q61268 124 aa9.57□□□□□ -0.88
Nup88-201ENSMUST00000035283 Plac8l1Q08EJ0 177 aa9.57□□□□□ -0.88
Nup88-201ENSMUST00000035283 Wnk1P83741 2377 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 Defa16P50714 93 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 Rnf152Q8BG47 203 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 4930544G11RikQ9CR99 193 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 Trav13-4-dv7A0A075B6C2 110 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 Gm11565A2A4M7 156 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 PemtQ61907 199 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 Cdc42se2Q8BGH7 84 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 Q99M08 65 aa9.56□□□□□ -0.88
Nup88-201ENSMUST00000035283 MalO09198 153 aa9.55□□□□□ -0.88
Nup88-201ENSMUST00000035283 5730596B20RikQ8BQ08 205 aa9.55□□□□□ -0.88
Nup88-201ENSMUST00000035283 Srsf12Q8C8K3 266 aa9.55□□□□□ -0.88
Nup88-201ENSMUST00000035283 PrlhG3UWC3 86 aa9.55□□□□□ -0.88
Nup88-201ENSMUST00000035283 BB014433Q8C5R5 389 aa9.54□□□□□ -0.88
Nup88-201ENSMUST00000035283 Muc2Q80Z19 2680 aa9.54□□□□□ -0.88
Nup88-201ENSMUST00000035283 Gm10647E9Q8X0 124 aa9.54□□□□□ -0.88
Nup88-201ENSMUST00000035283 Rpl36aP83882 106 aaKnown RBP9.54□□□□□ -0.88
Nup88-201ENSMUST00000035283 Gm9913Q8BQQ2 135 aa9.54□□□□□ -0.88
Nup88-201ENSMUST00000035283 Pfn2Q9JJV2 140 aa9.54□□□□□ -0.88
Nup88-201ENSMUST00000035283 4930546C10RikE9Q4Y3 121 aa9.53□□□□□ -0.88
Nup88-201ENSMUST00000035283 Vmo1Q5SXG7 201 aa9.53□□□□□ -0.88
Nup88-201ENSMUST00000035283 Igkv1-35A0A0G2JDE5 120 aa9.53□□□□□ -0.88
Nup88-201ENSMUST00000035283 Gm10577Q3UDV9 132 aa9.53□□□□□ -0.88
Nup88-201ENSMUST00000035283 Pdzd2E9Q1M1 2796 aa9.52□□□□□ -0.88
Nup88-201ENSMUST00000035283 Trav9d-3A0A075B695 113 aa9.52□□□□□ -0.89
Nup88-201ENSMUST00000035283 Crlf1Q9JM58 425 aa9.52□□□□□ -0.89
Nup88-201ENSMUST00000035283 Tep1P97499 2629 aa9.52□□□□□ -0.89
Nup88-201ENSMUST00000035283 Trav11A0A0B4J1J9 114 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Igkv1-117A0A140T8M0 119 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Defa2P28309 93 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Gm10300Q8C8P7 189 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Nop10Q9CQS2 64 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Znf414Q9DCK4 299 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Defb18Q30KP5 85 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Defb29Q8BGW9 78 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Lypd5Q9D7Z7 256 aa9.51□□□□□ -0.89
Nup88-201ENSMUST00000035283 Cox6b1P56391 86 aaKnown RBP9.5□□□□□ -0.89
Nup88-201ENSMUST00000035283 Gm8439G3UWA7 96 aa9.5□□□□□ -0.89
Nup88-201ENSMUST00000035283 Scgb1b2O35176 93 aa9.5□□□□□ -0.89
Nup88-201ENSMUST00000035283 Sh2d1aO88890 126 aa9.5□□□□□ -0.89
Nup88-201ENSMUST00000035283 Defa25Q5G864 92 aa9.5□□□□□ -0.89
Nup88-201ENSMUST00000035283 CrygaP04345 174 aa9.49□□□□□ -0.89
Nup88-201ENSMUST00000035283 Cops9Q3U898 57 aa9.49□□□□□ -0.89
Nup88-201ENSMUST00000035283 Ndufa12Q7TMF3 145 aaKnown RBP9.49□□□□□ -0.89
Nup88-201ENSMUST00000035283 Defb42Q8BVB5 75 aa9.49□□□□□ -0.89
Nup88-201ENSMUST00000035283 4930524J08RikQ9CUJ5 163 aa9.49□□□□□ -0.89
Nup88-201ENSMUST00000035283 Cep192E9Q4Y4 2514 aaKnown RBP9.49□□□□□ -0.89
Nup88-201ENSMUST00000035283 B230359F08RikA0A0B4J1K3 109 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 Gm7257D3YX25 99 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 GfyJ3KML8 504 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 Gm10549Q3URY4 149 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 Lage3Q9CR70 148 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 Rif1Q6PR54 2419 aaKnown RBP9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 Myo9aQ8C170 2542 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 Tm2d2Q8R0I4 213 aa9.48□□□□□ -0.89
Nup88-201ENSMUST00000035283 BsnO88737 3942 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Gm7075D3Z497 112 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 P01755 137 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Ppp1r32Q148A4 427 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Kmt2bO08550 2713 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Rnase1P00683 149 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Rpl28P41105 137 aaKnown RBP9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Mapk1ip1lQ8BH93 242 aa9.47□□□□□ -0.89
Nup88-201ENSMUST00000035283 Igf1P05017 153 aa9.46□□□□□ -0.89
Nup88-201ENSMUST00000035283 Defb50Q6TU36 73 aa9.46□□□□□ -0.89
Nup88-201ENSMUST00000035283 9430069I07RikQ9CX21 111 aa9.46□□□□□ -0.89
Nup88-201ENSMUST00000035283 Ighv1-49A0A0A6YWX2 117 aa9.46□□□□□ -0.9
Nup88-201ENSMUST00000035283 ScxQ64124 207 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms