RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 P01755 137 aa17.04■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 PlaurP35456 327 aa17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 1700056E22RikF7CNM6 234 aa17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Plxnb1Q8CJH3 2119 aa17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Igkv1-110A0A0B4J1I0 119 aa17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Rpl28P41105 137 aaKnown RBP17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 4930564D02RikQ9D4S4 103 aa17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 SrarpQ3ULG3 163 aa17.03■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Ighv1-72P01751 139 aa17.01■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Gm10509O88255 85 aa17.01■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Obox2E9PXV9 151 aa17.01■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Col6a6Q8C6K9 2265 aa17■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Pcnx1Q9QYC1 2344 aa17■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Wfdc10Q3V2J9 124 aa17■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Ighv10-3A0A075B5T6 119 aa16.99■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Gm21748Q3UE70 102 aa16.99■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Jmjd1cQ69ZK6 2350 aa16.99■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Fhl2O70433 279 aa16.99■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 H2al1kJ3QP08 105 aa16.98■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Usf3B2RUQ2 2221 aa16.98■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Gm10490F6VBM2 120 aa16.98■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Cdc42se2Q8BGH7 84 aa16.98■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Ptprz1B9EKR1 2312 aa16.98■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Gm10647E9Q8X0 124 aa16.98■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 LhbO09108 141 aa16.97■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 4930556J24RikQ9D4U7 146 aa16.97■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Gm6899Q3USS0 134 aa16.97■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 4930524J08RikQ9CUJ5 163 aa16.97■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Sprr2jO70561 109 aa16.97■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 UqcrqQ9CQ69 82 aa16.97■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Ly6c2P0CW03 131 aa16.96■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Ighv2-9-1A0A075B697 116 aa16.96■□□□□ 0.31
Sh3rf1-201ENSMUST00000034060 Sptan1P16546 2472 aaKnown RBP16.95■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Notch4P31695 1964 aa16.94■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 E130114P18RikF6S0S7 154 aa16.94■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Krtap27-1E9PX37 202 aa16.93■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Fer1l4A3KGK3 1992 aa16.93■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Arhgef17Q80U35 2057 aa16.93■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Tet2Q4JK59 1912 aaKnown RBP16.93■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Fam19a5Q91WE9 132 aa16.93■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 P84750 121 aa16.93■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 CadB2RQC6 2225 aa16.92■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Znf706Q9D115 76 aaKnown RBP16.92■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 AgrnA2ASQ1 1950 aa16.92■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Gm11011D3Z3L9 86 aa16.91■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Ovol3D3YYM0 189 aa16.9■□□□□ 0.3
Sh3rf1-201ENSMUST00000034060 Dkk4Q8VEJ3 221 aa16.89■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Cyyr1Q8VIH7 165 aa16.89■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Sdk2Q6V4S5 2176 aa16.89■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Tet1Q3URK3 2007 aaKnown RBP16.88■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Defb40Q70KL2 73 aa16.87■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 1700074P13RikQ9D9G7 251 aa16.86■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Wfdc15aQ8BH89 80 aa16.86■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Gm10549Q3URY4 149 aa16.86■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Defb42Q8BVB5 75 aa16.84■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Gm5142Q8C5X9 133 aa16.84■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Tanc2A2A690 1994 aa16.83■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Cacna1gQ5SUF7 2381 aa16.83■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Wdr90Q6ZPG2 1874 aa16.83■□□□□ 0.29
Sh3rf1-201ENSMUST00000034060 Gm8439G3UWA7 96 aa16.83■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Gm10845Q3UNY9 185 aa16.83■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 ScxQ64124 207 aa16.83■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 TeppQ6IMH0 216 aa16.83■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 PrlhG3UWC3 86 aa16.82■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Trbv13-2A0A140T8N6 113 aa16.82■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Ifitm6A0A1B0GS75 124 aa16.82■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Gm9922Q8C3P1 144 aa16.82■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Dopey2Q3UHQ6 2295 aa16.81■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Q9DAB9 146 aa16.8■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Wfdc12Q9JHY3 85 aa16.8■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Gm9925F6T2U3 160 aa16.8■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 H2al1mQ9DAD9 105 aa16.8■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Prpf8Q99PV0 2335 aaKnown RBP16.8■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Spink13Q3UTS8 97 aa16.79■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Adamts20P59511 1906 aa16.79■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Gm10135F6TEE5 83 aa16.79■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Cdip1Q9DB75 208 aa16.79■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Dscaml1Q4VA61 2053 aa16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Igkv8-30A0A140T8M3 121 aa16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 FshbQ60687 130 aa16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 CdsnQ7TPC1 561 aa16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Cnot1Q6ZQ08 2375 aaKnown RBP16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 U90926O08546 118 aa16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Csdc2Q91YQ3 154 aa16.78■□□□□ 0.28
Sh3rf1-201ENSMUST00000034060 Shisa2Q8QZV2 295 aa16.77■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Wisp2Q9Z0G4 251 aa16.77■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 SycnQ8VCK7 134 aa16.76■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 4930432M17RikQ3V0W9 174 aa16.76■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Ntn5Q3UQ22 452 aa16.75■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Crip3Q6Q6R3 243 aa16.74■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 ColqO35348 457 aa16.73■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 BC025920Q3US60 128 aa16.73■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Gm5153P01627 120 aa16.73■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Pla2g2cP48076 150 aa16.73■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Gpha2Q925Q5 128 aa16.73■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 Gm26566Q8CAC1 153 aa16.72■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 B230217C12RikE9Q3Z1 139 aa16.71■□□□□ 0.27
Sh3rf1-201ENSMUST00000034060 P06329 120 aa16.7■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Igkv3-12A0A140T8P0 119 aa16.7■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Col6a4A2AX52 2309 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms