RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Snhg11Q4G0K9 87 aa11.44□□□□□ -0.58
Trim54-201ENSMUST00000013771 Ss18Q62280 418 aa11.44□□□□□ -0.58
Trim54-201ENSMUST00000013771 Q9DAA3 117 aa11.44□□□□□ -0.58
Trim54-201ENSMUST00000013771 Krtap13O88375 197 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Gata1P17679 413 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Reg3bP35230 175 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Eif4ebp1Q60876 117 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Tax1bp3Q9DBG9 124 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Tcrg-C1A0A075B5Z0 172 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Gm45521A0A1B0GRK0 198 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Tcrg-C3L7N479 172 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 S100a8P27005 89 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Hnrnpa3Q8BG05 379 aaKnown RBP11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 A530064D06RikQ8BNV8 229 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Ammecr1lQ8JZZ6 310 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Cysltr1Q99JA4 352 aa11.43□□□□□ -0.58
Trim54-201ENSMUST00000013771 Trav9d-3A0A075B695 113 aa11.42□□□□□ -0.58
Trim54-201ENSMUST00000013771 AponG3X9D6 251 aa11.42□□□□□ -0.58
Trim54-201ENSMUST00000013771 Clec4b2Q67DU8 208 aa11.42□□□□□ -0.58
Trim54-201ENSMUST00000013771 Atp5lQ9CPQ8 103 aa11.42□□□□□ -0.58
Trim54-201ENSMUST00000013771 Vps13bQ80TY5 3993 aa11.42□□□□□ -0.58
Trim54-201ENSMUST00000013771 Vmo1Q5SXG7 201 aa11.41□□□□□ -0.58
Trim54-201ENSMUST00000013771 Snx22Q8C084 192 aa11.41□□□□□ -0.58
Trim54-201ENSMUST00000013771 Pradc1Q9D9N8 188 aa11.41□□□□□ -0.58
Trim54-201ENSMUST00000013771 Higd1aQ9JLR9 95 aa11.41□□□□□ -0.58
Trim54-201ENSMUST00000013771 Tcf24V9GWT9 166 aa11.41□□□□□ -0.58
Trim54-201ENSMUST00000013771 Defa30E9QPZ2 93 aa11.4□□□□□ -0.58
Trim54-201ENSMUST00000013771 ScxQ64124 207 aa11.4□□□□□ -0.58
Trim54-201ENSMUST00000013771 TirapQ99JY1 241 aa11.4□□□□□ -0.58
Trim54-201ENSMUST00000013771 Gm17472A0A075B683 117 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Ighv2-6-8A0A0A6YWY9 116 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Trbv13-2A0A140T8N6 113 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Fam240aJ3QNP9 97 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 F11rO88792 300 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 P18527 97 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Rpl39P62892 51 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Q5BN45 167 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Gng7Q61016 68 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Vmn1r197Q8R265 298 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Atp6v0e2Q91XE7 81 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Ndufs7Q9DC70 224 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Gnb1lQ9EQ15 326 aa11.39□□□□□ -0.59
Trim54-201ENSMUST00000013771 Spink4O35679 86 aa11.38□□□□□ -0.59
Trim54-201ENSMUST00000013771 P01837 106 aa11.38□□□□□ -0.59
Trim54-201ENSMUST00000013771 P03985 172 aa11.38□□□□□ -0.59
Trim54-201ENSMUST00000013771 Tal2Q62282 108 aa11.38□□□□□ -0.59
Trim54-201ENSMUST00000013771 Wfdc21Q8BTE6 63 aa11.38□□□□□ -0.59
Trim54-201ENSMUST00000013771 Mustn1Q99JI1 82 aa11.38□□□□□ -0.59
Trim54-201ENSMUST00000013771 Cox7a1P56392 80 aa11.37□□□□□ -0.59
Trim54-201ENSMUST00000013771 Tmem97Q8VD00 176 aa11.36□□□□□ -0.59
Trim54-201ENSMUST00000013771 HydinQ80W93 5154 aa11.36□□□□□ -0.59
Trim54-201ENSMUST00000013771 Fam104aA2A6P4 185 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 FcorP0DJI6 106 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Defa22Q8C1N8 93 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 PpdpfQ9CR37 115 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Phlda3Q9WV95 125 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Ighv1-11A0A0A6YWI9 117 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Brd3osA0A1B0GRB6 84 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Vamp8O70404 101 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Fgf6P21658 208 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Tm4sf20Q9CQY8 226 aa11.35□□□□□ -0.59
Trim54-201ENSMUST00000013771 Igkv4-91A0A075B5L2 119 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 Trav4n-4A0A075B615 110 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 Smim13E9Q942 88 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 Gm21693J3QK27 380 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 Cks1brtQ3UNC9 96 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 BC106179Q8C9L1 186 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 Gm10295Q8CCF3 114 aa11.34□□□□□ -0.59
Trim54-201ENSMUST00000013771 Rpl36aP83882 106 aaKnown RBP11.33□□□□□ -0.6
Trim54-201ENSMUST00000013771 Q9D727 114 aa11.33□□□□□ -0.6
Trim54-201ENSMUST00000013771 Smr3aQ61900 147 aa11.32□□□□□ -0.6
Trim54-201ENSMUST00000013771 Gm1553Q66VB7 94 aa11.32□□□□□ -0.6
Trim54-201ENSMUST00000013771 Erg28Q9ERY9 140 aa11.32□□□□□ -0.6
Trim54-201ENSMUST00000013771 Cryba4Q9JJV0 196 aa11.32□□□□□ -0.6
Trim54-201ENSMUST00000013771 ApobE9Q414 4505 aa11.31□□□□□ -0.6
Trim54-201ENSMUST00000013771 Nat8b-psE0CYC6 232 aa11.31□□□□□ -0.6
Trim54-201ENSMUST00000013771 Smim1P0C8K7 78 aa11.31□□□□□ -0.6
Trim54-201ENSMUST00000013771 Tmem101Q91VP7 257 aa11.31□□□□□ -0.6
Trim54-201ENSMUST00000013771 Atxn7l1Q9CZ05 146 aa11.31□□□□□ -0.6
Trim54-201ENSMUST00000013771 Ighv1-72P01751 139 aa11.3□□□□□ -0.6
Trim54-201ENSMUST00000013771 E130208F15RikQ3UPV3 143 aa11.3□□□□□ -0.6
Trim54-201ENSMUST00000013771 Gatd1Q8BFQ8 220 aa11.3□□□□□ -0.6
Trim54-201ENSMUST00000013771 Ube2v1Q9CZY3 147 aa11.3□□□□□ -0.6
Trim54-201ENSMUST00000013771 LeprotO89013 131 aa11.29□□□□□ -0.6
Trim54-201ENSMUST00000013771 Plac1Q9JI83 173 aa11.29□□□□□ -0.6
Trim54-201ENSMUST00000013771 Dpm2Q9Z324 84 aa11.29□□□□□ -0.6
Trim54-201ENSMUST00000013771 Igkv2-137A0A0B4J1H6 120 aa11.28□□□□□ -0.6
Trim54-201ENSMUST00000013771 Rpl13aP19253 203 aaKnown RBP11.28□□□□□ -0.6
Trim54-201ENSMUST00000013771 Fam19a4Q7TPG5 135 aa11.28□□□□□ -0.6
Trim54-201ENSMUST00000013771 Gm16485Q8C4B7 115 aa11.28□□□□□ -0.6
Trim54-201ENSMUST00000013771 Bak1O08734 209 aa11.27□□□□□ -0.6
Trim54-201ENSMUST00000013771 3110070M22RikQ9DAQ7 118 aa11.27□□□□□ -0.6
Trim54-201ENSMUST00000013771 Mpv17l2Q8VIK2 200 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 Ankrd39Q9D2X0 183 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 Dnhd1D3Z2X2 4750 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 Mycbp2Q7TPH6 4711 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 Igkv4-53A0A0G2JFC6 119 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 BC107364E9Q5A2 140 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 OdaphJ3QNT8 126 aa11.26□□□□□ -0.61
Trim54-201ENSMUST00000013771 Ube2d3P61079 147 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 92.7 ms