RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 GfyJ3KML8 504 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Esp3J3QN49 87 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Pglyrp4Q0VB07 374 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Klk15Q8CGR4 254 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm4707V9GXN5 68 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Ccl1P10146 92 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Olfr312Q7TRZ9 308 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 8030423J24RikQ9CX45 142 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Kmt2aP55200 3966 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 NpyP57774 97 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Spink13Q3UTS8 97 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Ndufc2Q9CQ54 120 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Ighv9-1A0A0B4J1P3 117 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Tmem141A2AJB2 108 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Rtl10D3YWW5 146 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Phxr5P08399 672 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Slc25a48Q8BW66 306 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm9922Q8C3P1 144 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Q9D8Q6 235 aa6.04□□□□□ -1.44
Trim39-205ENSMUST00000173369 Dnah7bL7N1Y0 4068 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 Trdv1A0A075B657 112 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 P01747 120 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 Znf239P24399 201 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 Lgals4Q8K419 326 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 Mllt11P97783 90 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 AsipQ03288 131 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 Fam216aQ9DB54 251 aa6.03□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm29644A0A087WPG2 191 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm19935A0A1B0GSF9 52 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Sub1P11031 127 aaKnown RBP6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Obox8V9GWY9 217 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav6n-5A0A075B621 112 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav6-5A0A075B6B5 112 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 D730001G18RikA0A087WQU7 115 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm6040Q4QY32 63 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Tal2Q62282 108 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defb42Q8BVB5 75 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Ca1P13634 261 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm815Q3UWS2 115 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Foxi1Q922I5 372 aa6.02□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav13d-1A0A075B606 110 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav9n-2A0A0G2JDP3 113 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav13n-1A0A0G2JEU8 110 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Fgf6P21658 208 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 P84750 121 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 OstcQ78XF5 149 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Leprotl1Q9CQ74 131 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm27027S4R1M6 97 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm9507D3Z5T3 223 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Ins1P01325 108 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Ndufb4Q9CQC7 129 aa6.01□□□□□ -1.45
Trim39-205ENSMUST00000173369 Huwe1Q7TMY8 4377 aaKnown RBP6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defa16P50714 93 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Tmem258P61166 79 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Fam19a1Q7TPG8 133 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 NpbQ8K4P1 119 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 4930564D02RikQ9D4S4 103 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Q9DAB9 146 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav7-4A0A075B6C1 113 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 NrepQ07475 68 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm21748Q3UE70 102 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trav7d-4Q5R1H9 113 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Slc17a2Q5SZA1 478 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Olfr481Q8VGI5 312 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Spry2Q9QXV8 315 aa6□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm21874J3QNZ6 232 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 Atp5g3P56384 141 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 AI854703Q8BIN3 203 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm14137Q8CE97 175 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 Nop10Q9CQS2 64 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 P01753 117 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defa1P11477 93 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 A930003A15RikQ3U552 87 aa5.99□□□□□ -1.45
Trim39-205ENSMUST00000173369 Trbv13-1A0A0B4J1P8 112 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm10322F7D7I4 111 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defa3P28310 93 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defa10P50708 93 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defa15P50713 93 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Defa25Q5G864 92 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Higd2aQ9CQJ1 106 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gnb1lQ9EQ15 326 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Igkv4-62A0A0G2JDW9 117 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm5468Q8C3D3 155 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 Ighv6-7A0A0A6YWU3 119 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 PigyP0C1P0 71 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 QrfpQ8CE23 124 aa5.98□□□□□ -1.45
Trim39-205ENSMUST00000173369 P01738 130 aa5.97□□□□□ -1.45
Trim39-205ENSMUST00000173369 CrygaP04345 174 aa5.97□□□□□ -1.45
Trim39-205ENSMUST00000173369 Vpreb1P13372 142 aa5.97□□□□□ -1.45
Trim39-205ENSMUST00000173369 Rs1Q9Z1L4 224 aa5.97□□□□□ -1.45
Trim39-205ENSMUST00000173369 Tcrg-C2A0A075B5Z2 167 aa5.96□□□□□ -1.45
Trim39-205ENSMUST00000173369 Gm28044L7N1X0 119 aa5.96□□□□□ -1.45
Trim39-205ENSMUST00000173369 P01853 167 aa5.96□□□□□ -1.45
Trim39-205ENSMUST00000173369 Tcl1b4P56844 120 aa5.96□□□□□ -1.45
Trim39-205ENSMUST00000173369 Ighv1-5A0A0A6YWG2 117 aa5.96□□□□□ -1.46
Trim39-205ENSMUST00000173369 Igkv4-68A0A0B4J1I7 117 aa5.96□□□□□ -1.46
Trim39-205ENSMUST00000173369 E130218I03RikA0A0U1RNU5 63 aa5.96□□□□□ -1.46
Trim39-205ENSMUST00000173369 TeppQ6IMH0 216 aa5.96□□□□□ -1.46
Trim39-205ENSMUST00000173369 Chchd5Q9CQP3 110 aa5.96□□□□□ -1.46
Trim39-205ENSMUST00000173369 Card19Q9D1I2 183 aa5.96□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms