RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Trav14n-2A0A0G2JDF5 121 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Tmem238lA0A1B0GS74 79 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Gm13030A2APQ6 143 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Shisal1Q0VBP7 198 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Arl14eplQ3UKZ7 152 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Megf9Q8BH27 600 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Atxn7l1Q9CZ05 146 aa9.32□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Fabp4P04117 132 aa9.31□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Nupr2Q497P3 102 aa9.31□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Gm16485Q8C4B7 115 aa9.31□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Olfr1262Q8VGN2 304 aa9.31□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Ormdl2Q9CQZ0 153 aa9.31□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Plac8l1Q08EJ0 177 aa9.3□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Trav3-3Q5R1C3 114 aa9.3□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Ryr2E9Q401 4966 aaKnown RBP9.3□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Ighv2-6-8A0A0A6YWY9 116 aa9.29□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Prss29Q99MS4 279 aa9.29□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Ryr3A2AGL3 4863 aa9.29□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Trav14-2A0A075B694 121 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Zfp951A0A087WRH0 451 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Gm45785A0A1B0GT05 94 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Esp4A8R0T8 117 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Gm28044L7N1X0 119 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Rab5bP61021 215 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Atg101Q9D8Z6 218 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Q9DAQ5 155 aa9.28□□□□□ -0.92
Ercc1-203ENSMUST00000160369 Tmem136Q3TYE7 245 aa9.27□□□□□ -0.93
Ercc1-203ENSMUST00000160369 A930004D18RikQ8C8W7 157 aa9.27□□□□□ -0.93
Ercc1-203ENSMUST00000160369 EnhoQ8K1D8 76 aa9.27□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Leprotl1Q9CQ74 131 aa9.27□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Tm4sf20Q9CQY8 226 aa9.27□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Ceacam12Q3UKP4 300 aa9.26□□□□□ -0.93
Ercc1-203ENSMUST00000160369 9130213A22RikQ3V3T2 120 aa9.26□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Q5BN45 167 aa9.26□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Mrpl32Q9DCI9 187 aaKnown RBP9.26□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Cdc42se2Q8BGH7 84 aa9.25□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Olfr983Q8VG90 315 aa9.25□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Ighv13-2A0A0A6YWN3 119 aa9.24□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Igll1P20764 209 aa9.24□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Rpl39P62892 51 aa9.24□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Trav7-6A0A075B640 112 aa9.23□□□□□ -0.93
Ercc1-203ENSMUST00000160369 PscaP57096 123 aa9.23□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Cfap126Q6P8X9 189 aa9.23□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Ighv1-61P01749 117 aa9.22□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Q3UNZ8 350 aa9.22□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Wfdc21Q8BTE6 63 aa9.22□□□□□ -0.93
Ercc1-203ENSMUST00000160369 Tmem223Q9CQE2 199 aaKnown RBP9.22□□□□□ -0.93
Ercc1-203ENSMUST00000160369 MobpQ9D2P8 170 aa9.22□□□□□ -0.93
Ercc1-203ENSMUST00000160369 9130204L05RikG3UWB8 92 aa9.21□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Krtap10-4Q08EG8 221 aa9.21□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Ramp1Q9WTJ5 148 aa9.21□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Vps13dB1ART2 4390 aa9.21□□□□□ -0.94
Ercc1-203ENSMUST00000160369 FcorP0DJI6 106 aa9.2□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gm9747Q810H1 104 aa9.2□□□□□ -0.94
Ercc1-203ENSMUST00000160369 RnasekQ8K3C0 98 aa9.2□□□□□ -0.94
Ercc1-203ENSMUST00000160369 OtorQ9JIE3 128 aa9.2□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Ighv2-9-1A0A075B697 116 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gm42420A0A0J9YUQ2 99 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Bak1O08734 209 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Prh1P05142 261 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Defa15P50713 93 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 BC025920Q3US60 128 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Fam19a2Q7TPG7 131 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Tnfsf18Q7TS55 173 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Higd1aQ9JLR9 95 aa9.19□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Igkv4-79A0A075B5L8 119 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Tmem238A9JSM3 176 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Dnah9B1AR51 4484 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gm21693J3QK27 380 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Rab24P35290 203 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Fam19a4Q7TPG5 135 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Chchd1Q9CQA6 118 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Pla2g2eQ9QUL3 142 aa9.18□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Trdv2-1A0A0G2JGB9 116 aa9.17□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Cd33Q63994 403 aa9.17□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Ifitm10Q8BR26 201 aa9.17□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Plac8Q9JI48 112 aa9.17□□□□□ -0.94
Ercc1-203ENSMUST00000160369 A0A1Y7VMQ4 148 aa9.16□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Ndufa1O35683 70 aa9.16□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gng4P50153 75 aa9.16□□□□□ -0.94
Ercc1-203ENSMUST00000160369 4930556J24RikQ9D4U7 146 aa9.16□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Timm17aQ9Z0V8 171 aa9.16□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Pkd1O08852 4293 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Igkv6-13A0A0G2JGY3 119 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gm11213A0A1B0GR83 88 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Krtap11-1E9Q2E9 183 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Bsph1Q3UW26 133 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gm5617Q91VN2 117 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Fam241bQ9D882 120 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Pgpep1Q9ESW8 209 aa9.15□□□□□ -0.94
Ercc1-203ENSMUST00000160369 Gm11444F6QMA6 170 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Ighv1-72P01751 139 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 TcraP01849 138 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Defa1P11477 93 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Rpl13aP19253 203 aaKnown RBP9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Defb40Q70KL2 73 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 BaalcQ8VHV1 145 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Sec11aQ9R0P6 179 aa9.14□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Ryr1E9PZQ0 5035 aa9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Trav9n-4A0A075B631 113 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms