RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Igkv9-123A0A140T8N8 117 aa4.28□□□□□ -1.72
Scn1a-203ENSMUST00000112366 Fhl1P97447 280 aaKnown RBP4.28□□□□□ -1.72
Scn1a-203ENSMUST00000112366 PtprqP0C5E4 2300 aa4.28□□□□□ -1.72
Scn1a-203ENSMUST00000112366 1520401A03RikA0A0J9YVH6 598 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Brca1P48754 1812 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-5A0A0A6YWG2 117 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 PlaurP35456 327 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm6899Q3USS0 134 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 4930535I16RikQ9CUI2 172 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Zfhx2Q2MHN3 2562 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm9970F6ZED4 185 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Mp68P56379 58 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Rnf185Q91YT2 192 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Jmjd1cQ69ZK6 2350 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv12-3A0A075B5T1 117 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Igkv8-28A0A0G2JE47 121 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Q08AU9 97 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Eml5Q8BQM8 1977 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 StrcQ8VIM6 1809 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Col11a2Q64739 1736 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-63A0A075B5X2 117 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-85A0A075B5Y6 117 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Klk5Q9D140 293 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Fhl3Q9R059 289 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm11011D3Z3L9 86 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv8-11A0A075B5X4 119 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10553J3QPF1 123 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P01630 113 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04940 107 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04941 107 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Odf3Q920N1 254 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10762Q9CZN6 115 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Defb40Q70KL2 73 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04945 108 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ndufa4l2Q4FZG9 87 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Higd2aQ9CQJ1 106 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv2-6-8A0A0A6YWY9 116 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Obox2E9PXV9 151 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 U90926O08546 118 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 CrygeQ03740 174 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 CrygfQ9CXV3 174 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm20538F6Z9R1 75 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04942 107 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Tet1Q3URK3 2007 aaKnown RBP4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10267M0QWD8 85 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Zfp36P22893 319 aaKnown RBP4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Arhgap32Q811P8 2089 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ly75Q60767 1723 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Arid2E9Q7E2 1828 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ifitm6A0A1B0GS75 124 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ube2d1P61080 147 aaKnown RBP4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Spint4Q9D263 159 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 1810032O08RikE9PZV8 113 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10577Q3UDV9 132 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm5468Q8C3D3 155 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 LitafQ9JLJ0 161 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Thsd7aQ69ZU6 1645 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm21994F6T2D2 329 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Sprr2jO70561 109 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 ScxQ64124 207 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Q9D131 166 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Brwd1Q921C3 2304 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv2-7A0A075B5Q8 116 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Wisp3D3Z5L9 354 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P06328 117 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Spry2Q9QXV8 315 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 ThadaA8C756 1938 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-75A0A075B5Y2 117 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Wfdc15bQ9JHY4 80 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Arhgap21Q6DFV3 1944 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Sec16aA2AIX1 2377 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P84751 237 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm5629P06327 117 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Zswim8Q3UHH1 1832 aaKnown RBP4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm12057A0A087WR21 115 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Wfdc15aQ8BH89 80 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Pip4p1Q3TWL2 284 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Plxna3P70208 1872 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 IgipA0A1B0GR74 53 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm17606F6ZL36 78 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Col8a2P25318 699 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Tanc2A2A690 1994 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Bean1Q9EQG5 255 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04944 107 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Fer1l4A3KGK3 1992 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Adamts9E9PUN6 1931 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Tcte2E9PY37 120 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 C130032M10RikQ8C888 123 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 2010109I03RikQ9CQ11 111 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 FcorP0DJI6 106 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P01674 108 aa4.21□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Smim1P0C8K7 78 aa4.21□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P18527 97 aa4.21□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Hcfc1Q61191 2045 aaKnown RBP4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Trbv13-2A0A140T8N6 113 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 LhbO09108 141 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 SnurfQ9WU12 71 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Ighv3-3A0A0A6YWL2 116 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Gm10647E9Q8X0 124 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Rnase1P00683 149 aa4.21□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms