RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Tcte2E9PY37 120 aa13.03□□□□□ -0.32
Usp48-201ENSMUST00000055131 9530003J23RikQ8BM26 151 aa13.03□□□□□ -0.32
Usp48-201ENSMUST00000055131 PtprsB0V2N1 1907 aa13.03□□□□□ -0.32
Usp48-201ENSMUST00000055131 PpdpfQ9CR37 115 aa13.03□□□□□ -0.32
Usp48-201ENSMUST00000055131 Ufsp1Q9CZP0 217 aa13.03□□□□□ -0.32
Usp48-201ENSMUST00000055131 Cryba4Q9JJV0 196 aa13.03□□□□□ -0.32
Usp48-201ENSMUST00000055131 Gm12353A2AGJ4 60 aa13.02□□□□□ -0.32
Usp48-201ENSMUST00000055131 2010109I03RikQ9CQ11 111 aa13.02□□□□□ -0.32
Usp48-201ENSMUST00000055131 Naa38Q9D2U5 125 aa13.02□□□□□ -0.32
Usp48-201ENSMUST00000055131 Spry2Q9QXV8 315 aa13.02□□□□□ -0.33
Usp48-201ENSMUST00000055131 FcorP0DJI6 106 aa13.01□□□□□ -0.33
Usp48-201ENSMUST00000055131 Ighv2-3A0A075B696 115 aa13.01□□□□□ -0.33
Usp48-201ENSMUST00000055131 Igf1P05017 153 aa13.01□□□□□ -0.33
Usp48-201ENSMUST00000055131 Dkk4Q8VEJ3 221 aa13.01□□□□□ -0.33
Usp48-201ENSMUST00000055131 OtoglF7A4A7 2325 aa13.01□□□□□ -0.33
Usp48-201ENSMUST00000055131 Tfpi2O35536 230 aa13.01□□□□□ -0.33
Usp48-201ENSMUST00000055131 Vpreb3D3Z6J4 130 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Atp5eP56382 52 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Esm1Q9QYY7 184 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Pla2g2dQ9WVF6 144 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Edn2P22389 175 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Gm5629P06327 117 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Tmem254aP0DN89 123 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Tmem254bP0DN90 123 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Tmem254cP0DN91 123 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Fam19a1Q7TPG8 133 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Notch3Q61982 2318 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Eml6Q5SQM0 1958 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Gm17521F6QAC8 156 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Ly6c2P0CW03 131 aa13□□□□□ -0.33
Usp48-201ENSMUST00000055131 Smim20D3Z7Q2 69 aa12.99□□□□□ -0.33
Usp48-201ENSMUST00000055131 Q9DAQ5 155 aa12.99□□□□□ -0.33
Usp48-201ENSMUST00000055131 1520401A03RikA0A0J9YVH6 598 aa12.99□□□□□ -0.33
Usp48-201ENSMUST00000055131 1110002E22RikE0CYV9 1786 aa12.99□□□□□ -0.33
Usp48-201ENSMUST00000055131 Q9D8Q6 235 aa12.98□□□□□ -0.33
Usp48-201ENSMUST00000055131 HelzQ6DFV5 1964 aaKnown RBP12.98□□□□□ -0.33
Usp48-201ENSMUST00000055131 Eif4ebp1Q60876 117 aa12.98□□□□□ -0.33
Usp48-201ENSMUST00000055131 Notch4P31695 1964 aa12.98□□□□□ -0.33
Usp48-201ENSMUST00000055131 Ighv1-63A0A075B5X2 117 aa12.98□□□□□ -0.33
Usp48-201ENSMUST00000055131 Znf239P24399 201 aa12.97□□□□□ -0.33
Usp48-201ENSMUST00000055131 Gm9925F6T2U3 160 aa12.97□□□□□ -0.33
Usp48-201ENSMUST00000055131 U90926O08546 118 aa12.97□□□□□ -0.33
Usp48-201ENSMUST00000055131 Igkv3-4A0A140T8Q4 119 aa12.97□□□□□ -0.33
Usp48-201ENSMUST00000055131 Arhgef17Q80U35 2057 aa12.97□□□□□ -0.33
Usp48-201ENSMUST00000055131 Wdr90Q6ZPG2 1874 aa12.97□□□□□ -0.33
Usp48-201ENSMUST00000055131 P01729 129 aa12.96□□□□□ -0.33
Usp48-201ENSMUST00000055131 Gm10401E9Q3K6 71 aa12.96□□□□□ -0.33
Usp48-201ENSMUST00000055131 Rnf185Q91YT2 192 aa12.96□□□□□ -0.33
Usp48-201ENSMUST00000055131 Gm12689Q8BQU9 117 aa12.95□□□□□ -0.34
Usp48-201ENSMUST00000055131 Nup210Q9QY81 1886 aaKnown RBP12.95□□□□□ -0.34
Usp48-201ENSMUST00000055131 Igkv4-92A0A0B4J1I2 117 aa12.95□□□□□ -0.34
Usp48-201ENSMUST00000055131 C1qcQ02105 246 aa12.95□□□□□ -0.34
Usp48-201ENSMUST00000055131 Vpreb2P13373 142 aa12.94□□□□□ -0.34
Usp48-201ENSMUST00000055131 TshbP12656 138 aa12.94□□□□□ -0.34
Usp48-201ENSMUST00000055131 Ly6hQ9WUC3 139 aa12.94□□□□□ -0.34
Usp48-201ENSMUST00000055131 Pde6gP09174 87 aa12.93□□□□□ -0.34
Usp48-201ENSMUST00000055131 Prr15lQ8JZM2 100 aa12.92□□□□□ -0.34
Usp48-201ENSMUST00000055131 Dscaml1Q4VA61 2053 aa12.92□□□□□ -0.34
Usp48-201ENSMUST00000055131 Igkv3-3A0A140T8Q0 119 aa12.92□□□□□ -0.34
Usp48-201ENSMUST00000055131 Wipf1Q8K1I7 493 aa12.92□□□□□ -0.34
Usp48-201ENSMUST00000055131 Gm10647E9Q8X0 124 aa12.92□□□□□ -0.34
Usp48-201ENSMUST00000055131 Gm10226O88253 85 aa12.92□□□□□ -0.34
Usp48-201ENSMUST00000055131 Ypel4Q65Z93 127 aa12.91□□□□□ -0.34
Usp48-201ENSMUST00000055131 A130051J06RikQ8CAU1 227 aa12.91□□□□□ -0.34
Usp48-201ENSMUST00000055131 Dido1Q8C9B9 2256 aaKnown RBP12.91□□□□□ -0.34
Usp48-201ENSMUST00000055131 SptssbQ925E8 76 aa12.9□□□□□ -0.34
Usp48-201ENSMUST00000055131 E130114P18RikF6S0S7 154 aa12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 Plac8l1Q08EJ0 177 aa12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 Cfc1P97766 202 aa12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 SvipQ3UZP4 77 aa12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 Chd8Q09XV5 2582 aaKnown RBP12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 Klk9Q32M27 251 aa12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 PscaP57096 123 aa12.89□□□□□ -0.35
Usp48-201ENSMUST00000055131 4930535I16RikQ9CUI2 172 aa12.88□□□□□ -0.35
Usp48-201ENSMUST00000055131 Ighv8-5A0A0A6YY60 119 aa12.88□□□□□ -0.35
Usp48-201ENSMUST00000055131 PrlhG3UWC3 86 aa12.88□□□□□ -0.35
Usp48-201ENSMUST00000055131 Sdk1Q3UH53 2193 aa12.87□□□□□ -0.35
Usp48-201ENSMUST00000055131 Igkv1-117A0A140T8M0 119 aa12.87□□□□□ -0.35
Usp48-201ENSMUST00000055131 Ighv1-72P01751 139 aa12.87□□□□□ -0.35
Usp48-201ENSMUST00000055131 EnhoQ8K1D8 76 aa12.87□□□□□ -0.35
Usp48-201ENSMUST00000055131 Ly6gP35461 111 aa12.87□□□□□ -0.35
Usp48-201ENSMUST00000055131 Ube2d4D3YUH6 135 aa12.87□□□□□ -0.35
Usp48-201ENSMUST00000055131 SbsponQ3UPR9 264 aa12.86□□□□□ -0.35
Usp48-201ENSMUST00000055131 Gm16223Q8CBM3 117 aa12.86□□□□□ -0.35
Usp48-201ENSMUST00000055131 Ighv1-5A0A0A6YWG2 117 aa12.85□□□□□ -0.35
Usp48-201ENSMUST00000055131 9430015G10RikA2ASP7 199 aa12.85□□□□□ -0.35
Usp48-201ENSMUST00000055131 Fam19a5Q91WE9 132 aa12.85□□□□□ -0.35
Usp48-201ENSMUST00000055131 Cox7bP56393 80 aa12.85□□□□□ -0.35
Usp48-201ENSMUST00000055131 Defb13Q8R2I4 64 aa12.85□□□□□ -0.35
Usp48-201ENSMUST00000055131 Fgfbp3Q1HCM0 245 aa12.85□□□□□ -0.35
Usp48-201ENSMUST00000055131 Fgf23Q9EPC2 251 aa12.84□□□□□ -0.35
Usp48-201ENSMUST00000055131 Gm9805F6YK59 57 aa12.84□□□□□ -0.35
Usp48-201ENSMUST00000055131 Ighv1-61P01749 117 aa12.84□□□□□ -0.35
Usp48-201ENSMUST00000055131 Gm1968Q3T9I3 115 aa12.84□□□□□ -0.35
Usp48-201ENSMUST00000055131 ScxQ64124 207 aa12.84□□□□□ -0.35
Usp48-201ENSMUST00000055131 Rnf152Q8BG47 203 aa12.84□□□□□ -0.35
Usp48-201ENSMUST00000055131 Igkv1-110A0A0B4J1I0 119 aa12.83□□□□□ -0.36
Usp48-201ENSMUST00000055131 Tmem213Q08EA8 116 aa12.83□□□□□ -0.36
Usp48-201ENSMUST00000055131 Fer1l4A3KGK3 1992 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 CtrlQ9ER05 264 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms