RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Trav13-4-dv7A0A075B6C2 110 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Sh2d1aO88890 126 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Tet2Q4JK59 1912 aaKnown RBP6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm21060J3KMU4 56 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Cdh23Q99PF4 3354 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Akap13E9Q394 2776 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 P01674 108 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 P06328 117 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gata3P23772 443 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 4930470P17RikQ9D542 155 aa6.26□□□□□ -1.41
Trub1-201ENSMUST00000026072 Zfp292Q9Z2U2 2698 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Igkv1-35A0A0G2JDE5 120 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm10251J3QPM5 127 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm2916Q9D9B9 127 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Obox8V9GWY9 217 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm17472A0A075B683 117 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm44965A0A0N4SVR3 59 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Lmo4P61969 165 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm9936Q8C864 160 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Tm2d2Q8R0I4 213 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Higd2aQ9CQJ1 106 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 P01728 117 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Camk2n2Q78WH7 79 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Gm4861Q8C5A4 106 aa6.25□□□□□ -1.41
Trub1-201ENSMUST00000026072 Szt2A2A9C3 3431 aa6.24□□□□□ -1.41
Trub1-201ENSMUST00000026072 Trbv16A0A0B4J1H3 115 aa6.24□□□□□ -1.41
Trub1-201ENSMUST00000026072 E130116L18RikQ8BMV6 101 aa6.24□□□□□ -1.41
Trub1-201ENSMUST00000026072 Tax1bp3Q9DBG9 124 aa6.24□□□□□ -1.41
Trub1-201ENSMUST00000026072 Ndufa4l2Q4FZG9 87 aa6.24□□□□□ -1.41
Trub1-201ENSMUST00000026072 Wipf1Q8K1I7 493 aa6.24□□□□□ -1.41
Trub1-201ENSMUST00000026072 BC107364E9Q5A2 140 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 P01747 120 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 Reg3bP35230 175 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 Triap1Q9D8Z2 76 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 AtrQ9JKK8 2635 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 Pglyrp1O88593 182 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 Rnase1P00683 149 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 SvipQ3UZP4 77 aa6.23□□□□□ -1.41
Trub1-201ENSMUST00000026072 P01820 115 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Q9CX25 107 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Chd7A2AJK6 2986 aaKnown RBP6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Ighv1-82A0A0G2JEU7 117 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 P01745 121 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 P0C913 63 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Igkv3-10A0A0G2JGN0 119 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 ColqO35348 457 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 GhrhP16043 103 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Znf239P24399 201 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Pip4p1Q3TWL2 284 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 1110002E22RikE0CYV9 1786 aa6.22□□□□□ -1.41
Trub1-201ENSMUST00000026072 Sprr3O09116 238 aa6.21□□□□□ -1.41
Trub1-201ENSMUST00000026072 Fgf6P21658 208 aa6.21□□□□□ -1.41
Trub1-201ENSMUST00000026072 Tnrc18Q80WC3 2878 aa6.21□□□□□ -1.41
Trub1-201ENSMUST00000026072 Edn2P22389 175 aa6.21□□□□□ -1.42
Trub1-201ENSMUST00000026072 CrygdP04342 174 aa6.21□□□□□ -1.42
Trub1-201ENSMUST00000026072 Snai3Q9QY31 287 aa6.21□□□□□ -1.42
Trub1-201ENSMUST00000026072 Akap9Q70FJ1 3797 aa6.21□□□□□ -1.42
Trub1-201ENSMUST00000026072 Unc80Q8BLN6 3261 aa6.21□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm5878E9PUB3 99 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm26602M0QWA4 95 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 AtmQ62388 3066 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm5468Q8C3D3 155 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 PpdpfQ9CR37 115 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 Ighv1-11A0A0A6YWI9 117 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 Mast4Q811L6 2618 aa6.2□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm6899Q3USS0 134 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 Ighv2-3A0A075B696 115 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm3618D3Z4P5 127 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 Ebi3O35228 228 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 P18527 97 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 Rpl18aP62717 176 aaKnown RBP6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm10295Q8CCF3 114 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 AngP21570 145 aa6.19□□□□□ -1.42
Trub1-201ENSMUST00000026072 Trav11A0A0B4J1J9 114 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Brk1Q91VR8 75 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 2010109I03RikQ9CQ11 111 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Ufsp1Q9CZP0 217 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Cox7b2Q9D2H1 82 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Trav4d-3A0A075B625 110 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Ighv8-12A0A0G2JDE1 119 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm14137Q8CE97 175 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Dkk4Q8VEJ3 221 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 1700012A03RikQ9DAF1 130 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Adamts20P59511 1906 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Col6a3E9PWQ3 3284 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 Myo15bI7HPW8 3033 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 FcorP0DJI6 106 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 1520401A03RikA0A0J9YVH6 598 aa6.18□□□□□ -1.42
Trub1-201ENSMUST00000026072 C1qcQ02105 246 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 1700010B08RikQ9DAI7 102 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 BikO70337 150 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 Odf3Q920N1 254 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 Ighv2-6A0A075B6A7 116 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm3285A0A1W2P7U0 201 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm17577J3QNF7 156 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 Q9DAQ5 155 aa6.17□□□□□ -1.42
Trub1-201ENSMUST00000026072 PrlhG3UWC3 86 aa6.16□□□□□ -1.42
Trub1-201ENSMUST00000026072 Gm9925F6T2U3 160 aa6.16□□□□□ -1.42
Trub1-201ENSMUST00000026072 Q9D8Q6 235 aa6.16□□□□□ -1.42
Trub1-201ENSMUST00000026072 Igkv8-18A0A0B4J1J3 123 aa6.16□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 72.1 ms