RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ighv1-64A0A075B5X3 117 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Timm8bP62077 83 aaKnown RBP6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 GchfrP99025 84 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Fam241bQ9D882 120 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Mad2l1bpQ9DCX1 276 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Tmprss5Q9ER04 455 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 CrxO54751 299 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 MymxQ2Q5T5 84 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Smr3aQ61900 147 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 PemtQ61907 199 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Odf3Q920N1 254 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Lypd5Q9D7Z7 256 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm15294V9GXA7 121 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gphb5Q812B2 130 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Lyzl1Q9CPX3 148 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Klk5Q9D140 293 aa6.12□□□□□ -1.43
Trim39-205ENSMUST00000173369 Igkv4-70A0A0B4J1I5 116 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Igkv4-69A0A0B4J1I6 116 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Tnfsf11O35235 316 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 P01843 105 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Edn1P22387 202 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ighv1-82A0A0G2JEU7 117 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Defa34D3Z0J0 93 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 B9d2Q3UK10 175 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr365Q8VFT2 312 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr982Q8VGB3 321 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Triap1Q9D8Z2 76 aa6.11□□□□□ -1.43
Trim39-205ENSMUST00000173369 Omt2bD3YX29 119 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr218E9PWV2 313 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gp9O88186 177 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Sslp1Q3UN54 99 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Odf1Q61999 247 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr996Q7TRA0 314 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Fam19a5Q91WE9 132 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Arhgap32Q811P8 2089 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ighv1-50A0A075B5W1 117 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ighv5-9-1A0A0A6YVS4 126 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ighv1-9A0A0A6YW37 117 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Cdx4Q07424 282 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm5941Q497P9 117 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Fam19a2Q7TPG7 131 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Mgst1Q91VS7 155 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Higd1bQ99JY6 98 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Atp5g1Q9CR84 136 aa6.1□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm20807A0A0A6YXX7 232 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Zfp931A2AHM2 298 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 CenpwQ3URR0 86 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr904Q7TRC9 310 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gpr82Q8BZR0 328 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Spag11Q8K4N2 71 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ifi27l2aQ8R412 90 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Fbxl15Q91W61 300 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ighv1-53A0A075B5W3 117 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm6793B2RXM2 351 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm21983D6RFS9 131 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Umad1E0CX23 159 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 P01729 129 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Bsph2Q0Q236 131 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Duxbl2Q7TNE6 350 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Fxyd4Q9D2W0 88 aa6.09□□□□□ -1.43
Trim39-205ENSMUST00000173369 Trav8-1A0A075B641 109 aa6.09□□□□□ -1.44
Trim39-205ENSMUST00000173369 Krtap16-1A2A5X5 502 aa6.09□□□□□ -1.44
Trim39-205ENSMUST00000173369 Psg18B2RSG7 476 aa6.09□□□□□ -1.44
Trim39-205ENSMUST00000173369 Rom1P32958 351 aa6.09□□□□□ -1.44
Trim39-205ENSMUST00000173369 B430305J03RikQ8BQQ8 176 aa6.09□□□□□ -1.44
Trim39-205ENSMUST00000173369 Tmem89Q9DA04 169 aa6.09□□□□□ -1.44
Trim39-205ENSMUST00000173369 Olfr779E9PUS9 130 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Defa4P28311 92 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Tmem167bQ80X45 74 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Saa3P04918 122 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 P06329 120 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Egr2P08152 470 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Foxc1Q61572 553 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Leap2Q91V13 76 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Synj2bpQ9D6K5 145 aa6.08□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm5129F6YHA9 99 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Ccl25O35903 144 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm10118Q8C8J5 116 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Cox19Q8K0C8 92 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Krtap3-2Q9D638 99 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Krtap3-3Q9D7P0 99 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Rnf114Q9ET26 229 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 P01786 117 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Pde6hP61249 83 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Znf740Q6NZQ6 180 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Prss58Q8BW11 241 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Obox1Q9D350 204 aa6.07□□□□□ -1.44
Trim39-205ENSMUST00000173369 Trav6d-7A0A075B6B0 112 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm45717A0A1B0GT68 152 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm7257D3YX25 99 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Pou2af1Q64693 256 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm5741B2RVA4 72 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Saa4P31532 130 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Cox8bP48772 70 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 AW146154Q3TPQ7 468 aa6.06□□□□□ -1.44
Trim39-205ENSMUST00000173369 Gm28305F6U473 122 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Lyrm9Q3UN90 78 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Krtap26-1Q9D7N2 215 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 PrkdcP97313 4128 aa6.05□□□□□ -1.44
Trim39-205ENSMUST00000173369 Trav13n-2A0A0G2JF93 110 aa6.05□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 103.3 ms