RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Trav13d-1A0A075B606 110 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Col8a2P25318 699 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Cdpf1Q8R3A2 119 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Parp4E9PYK3 1969 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 PtprqP0C5E4 2300 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm42674D3YUT9 64 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 P84751 237 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Anapc1P53995 1944 aaKnown RBP9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Pkd1l2Q7TN88 2461 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Zfand3Q497H0 227 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Tcf20Q9EPQ8 1987 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Pcdh15Q99PJ1 1943 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Odf3l1Q810P2 275 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm9913Q8BQQ2 135 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Cox7b2Q9D2H1 82 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm17472A0A075B683 117 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ttc28Q80XJ3 2450 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm21060J3KMU4 56 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Igkv1-88A0A140T8N1 120 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Trav11A0A0B4J1J9 114 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Acyp1P56376 99 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Spink8Q09TK9 105 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Eml6Q5SQM0 1958 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 1700010B08RikQ9DAI7 102 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 AngP21570 145 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Igkv8-18A0A0B4J1J3 123 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 AvpP35455 168 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm14137Q8CE97 175 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Tmem223Q9CQE2 199 aaKnown RBP9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Fgf6P21658 208 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 9430069I07RikQ9CX21 111 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Prrc2aQ7TSC1 2158 aaKnown RBP9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Iglv1A0A075B663 117 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 P0C913 63 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 B9d2Q3UK10 175 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ramp1Q9WTJ5 148 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ighv1-11A0A0A6YWI9 117 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ndufa4l2Q4FZG9 87 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm26602M0QWA4 95 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 P01658 132 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 AcanQ61282 2132 aaKnown RBP9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Igkv2-109A0A075B5K6 120 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Trav13-1A0A075B644 110 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm9958Q8C9U4 106 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Trav13n-2A0A0G2JF93 110 aa9.77□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Klk12B2RVZ0 247 aa9.77□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm10542F6XDR3 90 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm5468Q8C3D3 155 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 1700012A03RikQ9DAF1 130 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 AW146154Q3TPQ7 468 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 P01674 108 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Odf3Q920N1 254 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Reg3bP35230 175 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 P06328 117 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Arhgap21Q6DFV3 1944 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Trav13-4-dv7A0A075B6C2 110 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Rnase1P00683 149 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm5878E9PUB3 99 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Igkv3-10A0A0G2JGN0 119 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Q9D131 166 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Brk1Q91VR8 75 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 4930470P17RikQ9D542 155 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tax1bp3Q9DBG9 124 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ormdl1Q921I0 153 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 HelzQ6DFV5 1964 aaKnown RBP9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Abca2P41234 2434 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ighv2-6A0A075B6A7 116 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 B230359F08RikA0A0B4J1K3 109 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Fam222aQ6PGH4 453 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Klk5Q9D140 293 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Snai3Q9QY31 287 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm12353A2AGJ4 60 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Higd2aQ9CQJ1 106 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Igkv1-35A0A0G2JDE5 120 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 CrygdP04342 174 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm10735Q3US96 136 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm3618D3Z4P5 127 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 BikO70337 150 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 MgamB5THE2 1827 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 DysfQ9ESD7 2090 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Q9CX25 107 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 TectaO08523 2155 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm17577J3QNF7 156 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Mrpl52Q9D0Y8 121 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm37389A0A0A6YW05 95 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tmem254aP0DN89 123 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tmem254bP0DN90 123 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tmem254cP0DN91 123 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Defb12Q8K4N3 78 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ube2aQ9Z255 152 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Igkv3-5A0A140T8M6 119 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 NrgnP60761 78 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ebi3O35228 228 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Fxyd5P97808 178 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Atp5eP56382 52 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Sprr3O09116 238 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Pde6gP09174 87 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Pip4p1Q3TWL2 284 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm44965A0A0N4SVR3 59 aa9.71□□□□□ -0.85
Gm28043-201ENSMUST00000130871 P01820 115 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms