RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Tmem263Q9DAM7 115 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 Rab37Q9JKM7 223 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm35549A0A0N4SUS7 141 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 Atp5lQ9CPQ8 103 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 NpwA0A1L1STR8 176 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 1810032O08RikE9PZV8 113 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 P01896 185 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Fam19a4Q7TPG5 135 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 BC106179Q8C9L1 186 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Ighv5-9-1A0A0A6YVS4 126 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm45785A0A1B0GT05 94 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 P01811 117 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Rpl13aP19253 203 aaKnown RBP9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Runx1Q03347 451 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Cdip1Q9DB75 208 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Itpr3P70227 2670 aa9.5□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm29666A0A087WQ99 126 aa9.49□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm21994F6T2D2 329 aa9.49□□□□□ -0.89
Nup88-203ENSMUST00000108531 Lect2O88803 151 aa9.49□□□□□ -0.89
Nup88-203ENSMUST00000108531 Lrcol1Q3URS3 161 aa9.49□□□□□ -0.89
Nup88-203ENSMUST00000108531 Ifitm10Q8BR26 201 aa9.49□□□□□ -0.89
Nup88-203ENSMUST00000108531 Prpf8Q99PV0 2335 aaKnown RBP9.49□□□□□ -0.89
Nup88-203ENSMUST00000108531 Cfc1P97766 202 aa9.48□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm21748Q3UE70 102 aa9.48□□□□□ -0.89
Nup88-203ENSMUST00000108531 Ndufs7Q9DC70 224 aa9.48□□□□□ -0.89
Nup88-203ENSMUST00000108531 Cryba4Q9JJV0 196 aa9.48□□□□□ -0.89
Nup88-203ENSMUST00000108531 NrgnP60761 78 aa9.48□□□□□ -0.89
Nup88-203ENSMUST00000108531 Qrich2A0A140LIY9 2337 aa9.48□□□□□ -0.89
Nup88-203ENSMUST00000108531 Ighv2-6-8A0A0A6YWY9 116 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm10490F6VBM2 120 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Cfap126Q6P8X9 189 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Mfap4Q9D1H9 257 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Synj2bpQ9D6K5 145 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Phlda3Q9WV95 125 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm5819E9PZ96 154 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 OdaphJ3QNT8 126 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 A530064D06RikQ8BNV8 229 aa9.47□□□□□ -0.89
Nup88-203ENSMUST00000108531 Esp24A8R0V6 68 aa9.46□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm6793B2RXM2 351 aa9.46□□□□□ -0.89
Nup88-203ENSMUST00000108531 A930009A15RikG3UYI6 118 aa9.46□□□□□ -0.89
Nup88-203ENSMUST00000108531 Rpl32-psP17932 135 aa9.46□□□□□ -0.89
Nup88-203ENSMUST00000108531 Ly86O88188 162 aa9.46□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gm9195A0A140LHT4 2805 aa9.45□□□□□ -0.9
Nup88-203ENSMUST00000108531 Ccl24Q9JKC0 119 aa9.45□□□□□ -0.9
Nup88-203ENSMUST00000108531 Psmb8P28063 276 aa9.45□□□□□ -0.9
Nup88-203ENSMUST00000108531 Cyyr1Q8VIH7 165 aa9.45□□□□□ -0.9
Nup88-203ENSMUST00000108531 Ube2e2Q91W82 201 aa9.45□□□□□ -0.9
Nup88-203ENSMUST00000108531 AY761184Q9D848 116 aa9.45□□□□□ -0.9
Nup88-203ENSMUST00000108531 Itpr1P11881 2749 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 Sorl1O88307 2215 aaKnown RBP9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 Igkv4-68A0A0B4J1I7 117 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 B230217C12RikE9Q3Z1 139 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gm10509O88255 85 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 3110070M22RikQ9DAQ7 118 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 HampQ9EQ21 83 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 OtoglF7A4A7 2325 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 Fhl2O70433 279 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 Cox17P56394 63 aa9.44□□□□□ -0.9
Nup88-203ENSMUST00000108531 P84751 237 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gatd1Q8BFQ8 220 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Crip2Q9DCT8 208 aaKnown RBP9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Cks1bP61025 79 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 March3Q8BRX9 218 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gm9936Q8C864 160 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Lgals4Q8K419 326 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Csmd2V9GX34 3611 aa9.43□□□□□ -0.9
Nup88-203ENSMUST00000108531 Ly6gP35461 111 aa9.42□□□□□ -0.9
Nup88-203ENSMUST00000108531 Reg3gO09049 174 aa9.42□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gata1P17679 413 aa9.42□□□□□ -0.9
Nup88-203ENSMUST00000108531 Fgfbp3Q1HCM0 245 aa9.42□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gm10135F6TEE5 83 aa9.41□□□□□ -0.9
Nup88-203ENSMUST00000108531 Defb47Q30KN1 79 aa9.41□□□□□ -0.9
Nup88-203ENSMUST00000108531 Ifi27l2aQ8R412 90 aa9.41□□□□□ -0.9
Nup88-203ENSMUST00000108531 Scgb1b24B1B0N6 92 aa9.41□□□□□ -0.9
Nup88-203ENSMUST00000108531 Defb18Q30KP5 85 aa9.41□□□□□ -0.9
Nup88-203ENSMUST00000108531 Abca2P41234 2434 aa9.4□□□□□ -0.9
Nup88-203ENSMUST00000108531 LrbaQ9ESE1 2856 aa9.4□□□□□ -0.9
Nup88-203ENSMUST00000108531 Ighv1-11A0A0A6YWI9 117 aa9.4□□□□□ -0.9
Nup88-203ENSMUST00000108531 Gm9887F6RFI0 207 aa9.4□□□□□ -0.9
Nup88-203ENSMUST00000108531 Srp14P16254 110 aaKnown RBP9.4□□□□□ -0.91
Nup88-203ENSMUST00000108531 Rbmy1bQ60990 380 aa9.4□□□□□ -0.91
Nup88-203ENSMUST00000108531 Anapc13Q8R034 74 aa9.4□□□□□ -0.91
Nup88-203ENSMUST00000108531 4930442H23RikQ9D5G7 103 aa9.4□□□□□ -0.91
Nup88-203ENSMUST00000108531 Rmi2Q3UPE3 149 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trav7d-3Q5R1I1 112 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trbv30A0A0B4J1P1 111 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Gm10322F7D7I4 111 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Klk1b4P00757 256 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Ighv1-72P01751 139 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 AngP21570 145 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Samd5Q3V1H9 173 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Q9DAQ5 155 aa9.39□□□□□ -0.91
Nup88-203ENSMUST00000108531 Gm11444F6QMA6 170 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 Srsf12Q8C8K3 266 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 Zc2hc1bQ9D534 172 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 AcacbE9Q4Z2 2448 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trdv5A0A075B661 115 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trav4-3A0A0B4J1K1 110 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 MrapQ9D159 127 aa9.38□□□□□ -0.91
Nup88-203ENSMUST00000108531 4930470P17RikQ9D542 155 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 161.5 ms