RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 P06329 120 aa14.13□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Mpv17l2Q8VIK2 200 aa14.13□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Morn5Q9DAI9 170 aa14.13□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 NpwA0A1L1STR8 176 aa14.12□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Srp14P16254 110 aaKnown RBP14.12□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Ankrd39Q9D2X0 183 aa14.12□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 TrrapQ80YV3 2565 aaKnown RBP14.12□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 LystP97412 3788 aa14.12□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Ifitm10Q8BR26 201 aa14.12□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Gm5819E9PZ96 154 aa14.11□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Rpl32-psP17932 135 aa14.11□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Anapc13Q8R034 74 aa14.11□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Rab37Q9JKM7 223 aa14.11□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Krtap27-1E9PX37 202 aa14.1□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Tmem263Q9DAM7 115 aa14.1□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Ighv1-52A0A0A6YXC3 117 aa14.1□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 C920008G01RikA0A0B4J1N1 112 aa14.1□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 P01643 108 aa14.1□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 P01802 115 aa14.1□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Ighv2-6-8A0A0A6YWY9 116 aa14.09□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Lgals4Q8K419 326 aa14.09□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Mrpl35Q9CQL6 188 aa14.09□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Fam216aQ9DB54 251 aa14.09□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Col7a1Q63870 2944 aa14.09□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Ly86O88188 162 aa14.08□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 BC106179Q8C9L1 186 aa14.08□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Gm9936Q8C864 160 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 4930564D02RikQ9D4S4 103 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Col6a4A2AX52 2309 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Gm35549A0A0N4SUS7 141 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Tmem213Q08EA8 116 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Prr3Q811B5 190 aaKnown RBP14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 4930442H23RikQ9D5G7 103 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Csmd2V9GX34 3611 aa14.07□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Gm17455G3UW87 128 aa14.06□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Lect2O88803 151 aa14.06□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Gatd1Q8BFQ8 220 aa14.06□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Gm37988J3QM41 62 aa14.06□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Smrp1Q2MH31 260 aa14.06□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Gm9961Q8BNV2 113 aa14.06□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Trbv17A0A140T8P8 114 aa14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 1700020N15RikL7MTX3 112 aa14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 P01811 117 aa14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 PlaurP35456 327 aa14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Samd5Q3V1H9 173 aa14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Cfap126Q6P8X9 189 aa14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Sptbn1Q62261 2363 aaKnown RBP14.05□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Ighv2-3A0A075B696 115 aa14.04□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Wfdc15aQ8BH89 80 aa14.04□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 March3Q8BRX9 218 aa14.04□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Defb2P82020 71 aa14.03□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Fam19a4Q7TPG5 135 aa14.03□□□□□ -0.16
Ccdc50-201ENSMUST00000039443 Cox17P56394 63 aa14.02□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Mfap4Q9D1H9 257 aa14.02□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Ighv5-9-1A0A0A6YVS4 126 aa14.01□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 P01753 117 aa14.01□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 A530064D06RikQ8BNV8 229 aa14.01□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 AI854703Q8BIN3 203 aa14□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 3110070M22RikQ9DAQ7 118 aa14□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Trav4-3A0A0B4J1K1 110 aa14□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 MsmbO08540 113 aa14□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Unc79Q0KK59 2596 aa14□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Gm10553J3QPF1 123 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Gm21748Q3UE70 102 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Dynlrb2Q9DAJ5 96 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Ighv2-7A0A075B5Q8 116 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Trav4d-3A0A075B625 110 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Ly6gP35461 111 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Crip2Q9DCT8 208 aaKnown RBP13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Ccl24Q9JKC0 119 aa13.99□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 H1fxQ80ZM5 188 aa13.98□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Dido1Q8C9B9 2256 aaKnown RBP13.98□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Gm10135F6TEE5 83 aa13.98□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 P84751 237 aa13.98□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Usp9xP70398 2559 aaKnown RBP13.97□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Fgfbp3Q1HCM0 245 aa13.97□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Cmya5Q70KF4 3739 aa13.97□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Esp24A8R0V6 68 aa13.96□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Trav7d-3Q5R1I1 112 aa13.96□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Timm17bQ9Z0V7 172 aa13.96□□□□□ -0.17
Ccdc50-201ENSMUST00000039443 Prelid3aQ8VE85 172 aa13.96□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Q9DAQ5 155 aa13.96□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ighv1-58A0A075B5W9 117 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 1810032O08RikE9PZV8 113 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gm10322F7D7I4 111 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gm10509O88255 85 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Defb47Q30KN1 79 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ifi27l2aQ8R412 90 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Synj2bpQ9D6K5 145 aa13.95□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Med13lQ6JPI3 2207 aa13.94□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Trav9-2A0A075B647 113 aa13.94□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Trav9-4A0A0B4J1K2 113 aa13.94□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 C2cd3Q52KB6 2323 aa13.94□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ighv1-11A0A0A6YWI9 117 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gm10490F6VBM2 120 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 OdaphJ3QNT8 126 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ighv1-72P01751 139 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 P04219 140 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Spag11Q8K4N2 71 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Utp20Q5XG71 2788 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms