RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Ighv1-85A0A075B5Y6 117 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Ighv1-5A0A0A6YWG2 117 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Q9D8Q6 235 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Lelp1Q9DAE3 120 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Ighv2-3A0A075B696 115 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Ccl25O35903 144 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Defb18Q30KP5 85 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Uqcrfs1Q9CR68 274 aa12.6□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Ighv5-9-1A0A0A6YVS4 126 aa12.59□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Gm44965A0A0N4SVR3 59 aa12.59□□□□□ -0.39
Rpf1-203ENSMUST00000199079 MsmbO08540 113 aa12.59□□□□□ -0.39
Rpf1-203ENSMUST00000199079 C1qcQ02105 246 aa12.59□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Slamf6Q9ET39 351 aa12.59□□□□□ -0.39
Rpf1-203ENSMUST00000199079 Krtap27-1E9PX37 202 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Cited2O35740 269 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gata3P23772 443 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Trav8-1A0A075B641 109 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gm10553J3QPF1 123 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 P06329 120 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 GalmQ8K157 342 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Dynlrb2Q9DAJ5 96 aa12.58□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gm21994F6T2D2 329 aa12.57□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ube2d1P61080 147 aaKnown RBP12.57□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Trbv17A0A140T8P8 114 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Q5BN45 167 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Clec5aQ9R007 190 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ighv2-7A0A075B5Q8 116 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Trbv13-1A0A0B4J1P8 112 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Defa37K9J724 93 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Defa5P28312 93 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Rpl39P62892 51 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Rpl24Q8BP67 157 aaKnown RBP12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ube2e2Q91W82 201 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gm26920S4R2A5 56 aa12.56□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Nat8b-psE0CYC6 232 aa12.55□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ccl19O70460 108 aa12.55□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gemin7Q9CWY4 129 aa12.55□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ccl24Q9JKC0 119 aa12.55□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Rs1Q9Z1L4 224 aa12.55□□□□□ -0.4
Rpf1-203ENSMUST00000199079 TrrapQ80YV3 2565 aaKnown RBP12.55□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Sptan1P16546 2472 aaKnown RBP12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 P01741 114 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Mllt11P97783 90 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Foxi1Q922I5 372 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ifitm1Q9D103 106 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Muc2Q80Z19 2680 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 F11rO88792 300 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Psmb8P28063 276 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Foxi2Q3I5G5 311 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Dmrt3Q80WT2 476 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 AI854703Q8BIN3 203 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Cysltr1Q99JA4 352 aa12.54□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gm6812B1AXU1 112 aa12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Runx1Q03347 451 aa12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gm1553Q66VB7 94 aa12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Tac4Q99N14 128 aa12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Higd1aQ9JLR9 95 aa12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ash1lQ99MY8 2958 aa12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Prpf8Q99PV0 2335 aaKnown RBP12.53□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ighv8-5A0A0A6YY60 119 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Igkv2-137A0A0B4J1H6 120 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Ighv8-12A0A0G2JDE1 119 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 P01802 115 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 TtrP07309 147 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Trav7-2Q5R1I3 112 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Fam222aQ6PGH4 453 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Srsf12Q8C8K3 266 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Pgpep1Q9ESW8 209 aa12.52□□□□□ -0.4
Rpf1-203ENSMUST00000199079 Gm45753A0A1C7CYU8 86 aa12.52□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Gm2564F6Z9S8 108 aa12.52□□□□□ -0.41
Rpf1-203ENSMUST00000199079 A930009A15RikG3UYI6 118 aa12.52□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Hint1P70349 126 aaKnown RBP12.52□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Dppa2Q9CWH0 301 aa12.52□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Gm42674D3YUT9 64 aa12.51□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Itpr3P70227 2670 aa12.51□□□□□ -0.41
Rpf1-203ENSMUST00000199079 SrarpQ3ULG3 163 aa12.51□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Akap13E9Q394 2776 aa12.51□□□□□ -0.41
Rpf1-203ENSMUST00000199079 1810032O08RikE9PZV8 113 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 P01753 117 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Tcf24V9GWT9 166 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Trav9-2A0A075B647 113 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Trav9-4A0A0B4J1K2 113 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 FcorP0DJI6 106 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Spink13Q3UTS8 97 aa12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Srsf9Q9D0B0 222 aaKnown RBP12.5□□□□□ -0.41
Rpf1-203ENSMUST00000199079 LeprotO89013 131 aa12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Cox17P56394 63 aa12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Cox8cA6H666 72 aa12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Fhl2O70433 279 aa12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Prr3Q811B5 190 aaKnown RBP12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 March3Q8BRX9 218 aa12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Hrct1Q9D6B9 109 aa12.49□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Cmya5Q70KF4 3739 aa12.48□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Col7a1Q63870 2944 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Ighv2-6-8A0A0A6YWY9 116 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Ube2d3P61079 147 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Ube2d2P62838 147 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Gm21370Q3T9V6 190 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Defa24Q5G865 93 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Synj2bpQ9D6K5 145 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms