RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Map1lc3aQ91VR7 121 aa10.9□□□□□ -0.66
Rnf4-207ENSMUST00000182709 Igkv4-70A0A0B4J1I5 116 aa10.9□□□□□ -0.66
Rnf4-207ENSMUST00000182709 Gm5878E9PUB3 99 aa10.9□□□□□ -0.66
Rnf4-207ENSMUST00000182709 Khdc1aQ3UWR2 166 aa10.9□□□□□ -0.66
Rnf4-207ENSMUST00000182709 Spag11Q8K4N2 71 aa10.9□□□□□ -0.66
Rnf4-207ENSMUST00000182709 Vsig4F6TUL9 280 aa10.9□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Tmem136Q3TYE7 245 aa10.9□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Olfr311Q5NC59 308 aa10.9□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ube2e2Q91W82 201 aa10.9□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ighv1-64A0A075B5X3 117 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Esp4A8R0T8 117 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Notch3Q61982 2318 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gkn1Q9CR36 201 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 8030423J24RikQ9CX45 142 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ighv14-1A0A075B5R4 117 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gm5464Q3UY29 175 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Cryba4Q9JJV0 196 aa10.89□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Fbn1Q61554 2873 aaKnown RBP10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ighv12-3A0A075B5T1 117 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gm20517G3UVU6 152 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 S100a4P07091 101 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Trav14-2A0A075B694 121 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 LhbO09108 141 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 P01794 123 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Khdc1cQ4KL78 166 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Il22ra1Q80XZ4 581 aa10.88□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ighv1-50A0A075B5W1 117 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 PlnP61014 52 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Spink13Q3UTS8 97 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ucn2Q99ML8 113 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 A930009A15RikG3UYI6 118 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Olfr312Q7TRZ9 308 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 BC048562Q80ZQ7 204 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Clec5aQ9R007 190 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Iglc1A0A0G2JE99 106 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Tmem238lA0A1B0GS74 79 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 1810032O08RikE9PZV8 113 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 P01756 117 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 P01757 117 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 P01843 105 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Defa3P28310 93 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Defa10P50708 93 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Defa15P50713 93 aa10.87□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gm14137Q8CE97 175 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 OtorQ9JIE3 128 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Rnase1P00683 149 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gpr82Q8BZR0 328 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Rnf185Q91YT2 192 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Mrpl36Q99N90 102 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Rbmxl2Q9DAE2 385 aaKnown RBP10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 CicQ924A2 2510 aa10.86□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Reg3gO09049 174 aa10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Snrpd3P62320 126 aaKnown RBP10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Foxi1Q922I5 372 aa10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gpx7Q99LJ6 186 aa10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Hivep1Q03172 2688 aa10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Tex26Q0VB26 296 aa10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Hspe1Q64433 102 aaKnown RBP10.85□□□□□ -0.67
Rnf4-207ENSMUST00000182709 4930447F04RikA2AFR2 126 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Tcl1b4P56844 120 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Tal2Q62282 108 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Fmc1Q9CR13 113 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 TcraP01849 138 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Gm21370Q3T9V6 190 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ndufa4l2Q4FZG9 87 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Nit2Q9JHW2 276 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Rs1Q9Z1L4 224 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Ighv2-3A0A075B696 115 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 7420426K07RikQ3UX66 186 aa10.84□□□□□ -0.67
Rnf4-207ENSMUST00000182709 Trav7-2Q5R1I3 112 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Dmbt1Q60997 2085 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Gm45753A0A1C7CYU8 86 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Hbb-bsA8DUK4 147 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Erdr1J3QMM0 206 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Hbb-b1P02088 147 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Bri3P28662 125 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Gtsf1lQ9CWD0 151 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Tex15F8VPN2 2785 aa10.83□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Notch2O35516 2470 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Fhl2O70433 279 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Znf580Q9DB38 172 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Gm8439G3UWA7 96 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 P01802 115 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Ndufa1O35683 70 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 TshbP12656 138 aa10.82□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Igkv4-69A0A0B4J1I6 116 aa10.81□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Tcrg-C1A0A075B5Z0 172 aa10.81□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Trbv13-1A0A0B4J1P8 112 aa10.81□□□□□ -0.68
Rnf4-207ENSMUST00000182709 PolP10400 120 aa10.81□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Ighv1-23A0A0A6YVW3 117 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Gm2564F6Z9S8 108 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Ccl19O70460 108 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Cks1brtQ3UNC9 96 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 SbsponQ3UPR9 264 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 1520401A03RikA0A0J9YVH6 598 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Gm28038F7BCN9 126 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Ccl25O35903 144 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Anapc13Q8R034 74 aa10.8□□□□□ -0.68
Rnf4-207ENSMUST00000182709 MdfiP70331 251 aa10.79□□□□□ -0.68
Rnf4-207ENSMUST00000182709 Ndufb4Q9CQC7 129 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 86.4 ms