RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Hivep2Q3UHF7 2430 aa14.61□□□□□ -0.07
Trim71-201ENSMUST00000111816 Zfyve26Q5DU37 2529 aa14.61□□□□□ -0.07
Trim71-201ENSMUST00000111816 Zcchc24B2RVL6 241 aaKnown RBP14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 Gm9881Q8BR56 211 aa14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 SostQ99P68 211 aa14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 Igkv6-32A0A140T8N9 115 aa14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 Them7Q9DCP4 223 aa14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 B230104I21RikQ3USW4 141 aa14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 4933414I15RikQ9D4D5 133 aa14.6□□□□□ -0.07
Trim71-201ENSMUST00000111816 Gm5129F6YHA9 99 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Tm2d2Q8R0I4 213 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Igkv3-3A0A140T8Q0 119 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 A730015C16RikQ8C992 119 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Zic4Q61467 341 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Igkv5-37A0A140T8N4 115 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Wbp1P97764 304 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Gm13090A2A899 111 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Atp6v0e1Q9CQD8 81 aa14.59□□□□□ -0.07
Trim71-201ENSMUST00000111816 Mbd6Q3TY92 1003 aa14.58□□□□□ -0.07
Trim71-201ENSMUST00000111816 1700012A03RikQ9DAF1 130 aa14.58□□□□□ -0.07
Trim71-201ENSMUST00000111816 P01794 123 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Cdpf1Q8R3A2 119 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Tln1P26039 2541 aaKnown RBP14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Ccl24Q9JKC0 119 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Timm17aQ9Z0V8 171 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Defb3Q9WTL0 63 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Wdr90Q6ZPG2 1874 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Ighv8-4A0A0A6YW26 117 aa14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Csrp2P97314 193 aaKnown RBP14.58□□□□□ -0.08
Trim71-201ENSMUST00000111816 Ighv1-62-1A0A075B5U3 116 aa14.57□□□□□ -0.08
Trim71-201ENSMUST00000111816 Rnf152Q8BG47 203 aa14.57□□□□□ -0.08
Trim71-201ENSMUST00000111816 3110021N24RikJ3QMN2 152 aa14.57□□□□□ -0.08
Trim71-201ENSMUST00000111816 Ube2e1P52482 193 aa14.56□□□□□ -0.08
Trim71-201ENSMUST00000111816 Thsd7aQ69ZU6 1645 aa14.56□□□□□ -0.08
Trim71-201ENSMUST00000111816 Gm20878L7N244 103 aa14.56□□□□□ -0.08
Trim71-201ENSMUST00000111816 Trbv14A0A140T8L9 115 aa14.56□□□□□ -0.08
Trim71-201ENSMUST00000111816 Gm10518F6UQQ9 182 aa14.56□□□□□ -0.08
Trim71-201ENSMUST00000111816 Trav12d-3A0A075B6A4 115 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 Cox6a1P43024 111 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 P01638 115 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 P01788 123 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 Wfdc10Q3V2J9 124 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 A830031A19RikQ8BNT5 113 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 Gm11733Q8BQP1 125 aa14.55□□□□□ -0.08
Trim71-201ENSMUST00000111816 P01655 112 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Gm10735Q3US96 136 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 SprnQ8BWU1 147 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Wipf1Q8K1I7 493 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Serp1Q9Z1W5 66 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Gm5941Q497P9 117 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Ptpn13Q64512 2453 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Pmaip1Q9JM54 103 aa14.54□□□□□ -0.08
Trim71-201ENSMUST00000111816 Q8C708 225 aa14.53□□□□□ -0.08
Trim71-201ENSMUST00000111816 Igkv4-92A0A0B4J1I2 117 aa14.52□□□□□ -0.08
Trim71-201ENSMUST00000111816 P84750 121 aa14.52□□□□□ -0.08
Trim71-201ENSMUST00000111816 Nop10Q9CQS2 64 aa14.52□□□□□ -0.08
Trim71-201ENSMUST00000111816 Zmat4Q8BZ94 229 aa14.52□□□□□ -0.08
Trim71-201ENSMUST00000111816 Pom121l2Q5SW25 972 aa14.52□□□□□ -0.08
Trim71-201ENSMUST00000111816 1700010B08RikQ9DAI7 102 aa14.52□□□□□ -0.09
Trim71-201ENSMUST00000111816 Reg3gO09049 174 aa14.52□□□□□ -0.09
Trim71-201ENSMUST00000111816 A0A1L1SR50 188 aa14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 Rnf138Q9CQE0 245 aaKnown RBP14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 4930470P17RikQ9D542 155 aa14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 Rpl18aP62717 176 aaKnown RBP14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 Zfp36l1P23950 338 aa14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 Rbx1P62878 108 aa14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 Igkv8-21A0A140T8P7 120 aa14.51□□□□□ -0.09
Trim71-201ENSMUST00000111816 Defb26Q30KN7 186 aa14.5□□□□□ -0.09
Trim71-201ENSMUST00000111816 Gm7257D3YX25 99 aa14.5□□□□□ -0.09
Trim71-201ENSMUST00000111816 Tfpi2O35536 230 aa14.5□□□□□ -0.09
Trim71-201ENSMUST00000111816 NpyP57774 97 aa14.5□□□□□ -0.09
Trim71-201ENSMUST00000111816 PrcdQ00LT2 53 aa14.49□□□□□ -0.09
Trim71-201ENSMUST00000111816 Ighv8-12A0A0G2JDE1 119 aa14.49□□□□□ -0.09
Trim71-201ENSMUST00000111816 Ighv1-52A0A0A6YXC3 117 aa14.49□□□□□ -0.09
Trim71-201ENSMUST00000111816 Mrps12O35680 139 aa14.49□□□□□ -0.09
Trim71-201ENSMUST00000111816 Ighv13-2A0A0A6YWN3 119 aa14.49□□□□□ -0.09
Trim71-201ENSMUST00000111816 Lypd8Q9D7S0 255 aa14.48□□□□□ -0.09
Trim71-201ENSMUST00000111816 P01660 111 aa14.48□□□□□ -0.09
Trim71-201ENSMUST00000111816 Camk2n2Q78WH7 79 aa14.48□□□□□ -0.09
Trim71-201ENSMUST00000111816 A0A1Y7VLU2 103 aa14.48□□□□□ -0.09
Trim71-201ENSMUST00000111816 Lyg1Q9D7Q0 197 aa14.48□□□□□ -0.09
Trim71-201ENSMUST00000111816 Ighv3-4A0A0A6YXF1 117 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 P18528 98 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Cox7a1P56392 80 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 7420426K07RikQ3UX66 186 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Klk12B2RVZ0 247 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Igkv1-88A0A140T8N1 120 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Gm9961Q8BNV2 113 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Klk13Q8CGR6 276 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Q99M08 65 aa14.47□□□□□ -0.09
Trim71-201ENSMUST00000111816 Gm17472A0A075B683 117 aa14.46□□□□□ -0.09
Trim71-201ENSMUST00000111816 P01793 123 aa14.46□□□□□ -0.09
Trim71-201ENSMUST00000111816 Igkv2-109A0A075B5K6 120 aa14.46□□□□□ -0.09
Trim71-201ENSMUST00000111816 D930007J09RikQ9D2K6 131 aa14.46□□□□□ -0.1
Trim71-201ENSMUST00000111816 C920008G01RikA0A0B4J1N1 112 aa14.46□□□□□ -0.1
Trim71-201ENSMUST00000111816 Defb13Q8R2I4 64 aa14.46□□□□□ -0.1
Trim71-201ENSMUST00000111816 EnhoQ8K1D8 76 aa14.45□□□□□ -0.1
Trim71-201ENSMUST00000111816 Msrb3Q8BU85 253 aa14.45□□□□□ -0.1
Trim71-201ENSMUST00000111816 Nxph4G3X9N5 304 aa14.45□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ppp1r32Q148A4 427 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 111.8 ms