RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Trbv16A0A0B4J1H3 115 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Rnf138Q9CQE0 245 aaKnown RBP11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Igkv4-92A0A0B4J1I2 117 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Gm17577J3QNF7 156 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 P04942 107 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Greb1Q3UHK3 1954 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Wipf1Q8K1I7 493 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Defb26Q30KN7 186 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Tanc1Q0VGY8 1856 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Tmem223Q9CQE2 199 aaKnown RBP11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Q9D131 166 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Cox7b2Q9D2H1 82 aa11.61□□□□□ -0.55
Shank1-202ENSMUST00000107935 Gm15217A2CG07 155 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 Wfdc15bQ9JHY4 80 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 IgipA0A1B0GR74 53 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 H2al1kJ3QP08 105 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 Cacna1iE9Q7P2 2199 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 Gm10542F6XDR3 90 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 Cox7a1P56392 80 aa11.6□□□□□ -0.55
Shank1-202ENSMUST00000107935 Q99M08 65 aa11.59□□□□□ -0.55
Shank1-202ENSMUST00000107935 Lypd6Q8BPP5 171 aa11.59□□□□□ -0.55
Shank1-202ENSMUST00000107935 Ighv1-12A0A0A6YXJ9 117 aa11.59□□□□□ -0.55
Shank1-202ENSMUST00000107935 Tfpi2O35536 230 aa11.59□□□□□ -0.55
Shank1-202ENSMUST00000107935 1700074P13RikQ9D9G7 251 aa11.58□□□□□ -0.56
Shank1-202ENSMUST00000107935 Plxna4Q80UG2 1893 aa11.58□□□□□ -0.56
Shank1-202ENSMUST00000107935 BlcapP62951 87 aa11.58□□□□□ -0.56
Shank1-202ENSMUST00000107935 P01728 117 aa11.57□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm19935A0A1B0GSF9 52 aa11.57□□□□□ -0.56
Shank1-202ENSMUST00000107935 PrcdQ00LT2 53 aa11.57□□□□□ -0.56
Shank1-202ENSMUST00000107935 Crip1P63254 77 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 C1qcQ02105 246 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 Itgb4A2A863 1818 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm21060J3KMU4 56 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 P06320 134 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 Nlrc5C3VPR6 1915 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ighv1-11A0A0A6YWI9 117 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 Atox1O08997 68 aaKnown RBP11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 P18527 97 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 B9d2Q3UK10 175 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 UrahQ9CRB3 118 aa11.56□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm10775Q3V290 127 aa11.55□□□□□ -0.56
Shank1-202ENSMUST00000107935 LoxP28301 411 aa11.55□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ube2d4D3YUH6 135 aa11.55□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm10553J3QPF1 123 aa11.55□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm12253Q5NC48 229 aa11.55□□□□□ -0.56
Shank1-202ENSMUST00000107935 Camk2n2Q78WH7 79 aa11.55□□□□□ -0.56
Shank1-202ENSMUST00000107935 9230109A22RikQ8BHE6 111 aa11.54□□□□□ -0.56
Shank1-202ENSMUST00000107935 4930535I16RikQ9CUI2 172 aa11.54□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ly6hQ9WUC3 139 aa11.54□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ighv3-1A0A075B5S6 116 aa11.54□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ebi3O35228 228 aa11.54□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ndufa4l2Q4FZG9 87 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm17324Q8C6J8 137 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm17521F6QAC8 156 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Zmat4Q8BZ94 229 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 4930470P17RikQ9D542 155 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ighv5-8A0A075B676 92 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Ighv1-53A0A075B5W3 117 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Trav9n-4A0A075B631 113 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 P01748 117 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm9949Q8C9F4 104 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Frem3Q5H8B9 2123 aa11.53□□□□□ -0.56
Shank1-202ENSMUST00000107935 Dnajc13D4AFX7 2248 aaKnown RBP11.52□□□□□ -0.56
Shank1-202ENSMUST00000107935 Fam110dQ80X91 271 aa11.52□□□□□ -0.56
Shank1-202ENSMUST00000107935 Psmb11Q8BG41 302 aa11.52□□□□□ -0.56
Shank1-202ENSMUST00000107935 Gm12689Q8BQU9 117 aa11.52□□□□□ -0.56
Shank1-202ENSMUST00000107935 Plxna2P70207 1894 aa11.52□□□□□ -0.57
Shank1-202ENSMUST00000107935 Ntf4Q80VU4 209 aa11.52□□□□□ -0.57
Shank1-202ENSMUST00000107935 A130051J06RikQ8CAU1 227 aa11.52□□□□□ -0.57
Shank1-202ENSMUST00000107935 Serp1Q9Z1W5 66 aa11.51□□□□□ -0.57
Shank1-202ENSMUST00000107935 Ube2aQ9Z255 152 aa11.51□□□□□ -0.57
Shank1-202ENSMUST00000107935 Plxnd1Q3UH93 1925 aa11.51□□□□□ -0.57
Shank1-202ENSMUST00000107935 Spry2Q9QXV8 315 aa11.51□□□□□ -0.57
Shank1-202ENSMUST00000107935 MsmpB1AWI6 139 aa11.51□□□□□ -0.57
Shank1-202ENSMUST00000107935 Sbf1Q6ZPE2 1867 aa11.51□□□□□ -0.57
Shank1-202ENSMUST00000107935 Gm9970F6ZED4 185 aa11.5□□□□□ -0.57
Shank1-202ENSMUST00000107935 Ighv12-3A0A075B5T1 117 aa11.5□□□□□ -0.57
Shank1-202ENSMUST00000107935 A230072I06RikQ3UUJ8 172 aa11.5□□□□□ -0.57
Shank1-202ENSMUST00000107935 Klk5Q9D140 293 aa11.5□□□□□ -0.57
Shank1-202ENSMUST00000107935 A830031A19RikQ8BNT5 113 aa11.5□□□□□ -0.57
Shank1-202ENSMUST00000107935 Ighv1-61P01749 117 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Eif4ebp1Q60876 117 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Odf3l1Q810P2 275 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Fancd2osQ9D4K4 178 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Ighv8-11A0A075B5X4 119 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 ThadaA8C756 1938 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Adamts9E9PUN6 1931 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Dock4P59764 1978 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Igkv1-117A0A140T8M0 119 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Smim1P0C8K7 78 aa11.49□□□□□ -0.57
Shank1-202ENSMUST00000107935 Cabin1G3X8Q1 2187 aaKnown RBP11.48□□□□□ -0.57
Shank1-202ENSMUST00000107935 P04944 107 aa11.48□□□□□ -0.57
Shank1-202ENSMUST00000107935 Cox7bP56393 80 aa11.48□□□□□ -0.57
Shank1-202ENSMUST00000107935 Csdc2Q91YQ3 154 aa11.48□□□□□ -0.57
Shank1-202ENSMUST00000107935 P06328 117 aa11.48□□□□□ -0.57
Shank1-202ENSMUST00000107935 Pi4kaE9Q3L2 2105 aa11.48□□□□□ -0.57
Shank1-202ENSMUST00000107935 Hoxb4P10284 250 aa11.47□□□□□ -0.57
Shank1-202ENSMUST00000107935 Fam19a5Q91WE9 132 aa11.47□□□□□ -0.57
Shank1-202ENSMUST00000107935 Gm10401E9Q3K6 71 aa11.47□□□□□ -0.57
Shank1-202ENSMUST00000107935 P01747 120 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms