RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Chchd7Q8K2Q5 85 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Igkv4-81A0A0G2JEY5 119 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm15557A6PWY0 234 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm3618D3Z4P5 127 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 9230109A22RikQ8BHE6 111 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm2916Q9D9B9 127 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Trav3-4A0A075B654 114 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 MsmpB1AWI6 139 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm6034E9Q101 117 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm19684G3UZ45 117 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Fgfbp3Q1HCM0 245 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Mfap4Q9D1H9 257 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Atp5eP56382 52 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Igkv4-57-1A0A075B5M4 119 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm29423A0A087WRM1 55 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Rnf183Q8QZS5 190 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Brd3osA0A1B0GRB6 84 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Tcte2E9PY37 120 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm21994F6T2D2 329 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01896 185 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Znf664Q4VA44 261 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ociad2Q9D8W7 154 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 CckP09240 115 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Olfr311Q5NC59 308 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 V1ra8Q9EQ48 279 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Defa27F2Z403 93 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ndufa4l2Q4FZG9 87 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ankrd39Q9D2X0 183 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv2-6-8A0A0A6YWY9 116 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Cox7b2Q9D2H1 82 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Fhl3Q9R059 289 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01643 108 aa5.62□□□□□ -1.51
Scn3a-201ENSMUST00000066432 1700010B08RikQ9DAI7 102 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Trav9d-1A0A075B699 112 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 GhrhP16043 103 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm5629P06327 117 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm15294V9GXA7 121 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv1-11A0A0A6YWI9 117 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm11444F6QMA6 170 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01788 123 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ccl6P27784 116 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv1-61P01749 117 aa5.61□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Trav12d-3A0A075B6A4 115 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm6899Q3USS0 134 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Cd33Q63994 403 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv1-62-2A0A0A6YXZ4 119 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01658 132 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01659 112 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Defb6Q91VD6 63 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv1-5A0A0A6YWG2 117 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Psmb8P28063 276 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Znf580Q9DB38 172 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 FasnP19096 2504 aaKnown RBP5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 A0A286YE02 88 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 KprpB2RUR4 657 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Tmem258P61166 79 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Reg3dQ9QUS9 175 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01790 122 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Q80X32 188 aaKnown RBP5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Odf3l1Q810P2 275 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Glrp1E9Q9S8 174 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 CnfnQ6PCW6 111 aa5.6□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01674 108 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Prop1P97458 223 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Clec4b2Q67DU8 208 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Rnf144bQ8BKD6 301 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Unc79Q0KK59 2596 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 IgipA0A1B0GR74 53 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm4064A0A087WR82 380 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm10352B2RWR6 380 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 1700056E22RikF7CNM6 234 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm21693J3QK27 380 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Rbmy1a1O35698 380 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Tm2d2Q8R0I4 213 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Zfp951A0A087WRH0 451 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Lmo4P61969 165 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Cdpf1Q8R3A2 119 aa5.59□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv1-85A0A075B5Y6 117 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 4933414I15RikQ9D4D5 133 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Klk11Q9QYN3 276 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Map6d1Q14BB9 191 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Spink1P09036 80 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Tm2d1Q99MB3 208 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 CrygbP04344 175 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Ndufa12Q7TMF3 145 aaKnown RBP5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Mustn1Q99JI1 82 aa5.58□□□□□ -1.52
Scn3a-201ENSMUST00000066432 P01787 123 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 P01792 123 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 A130051J06RikQ8CAU1 227 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Igkv4-57A0A0A6YYE7 117 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Igkv8-16A0A0G2JDG9 121 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 E130114P18RikF6S0S7 154 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Ang4Q3TMQ6 144 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 1810032O08RikE9PZV8 113 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 P01820 115 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Gm11733Q8BQP1 125 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Timm17bQ9Z0V7 172 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Gm4707V9GXN5 68 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Ighv3-8A0A075B5T0 131 aa5.57□□□□□ -1.52
Scn3a-201ENSMUST00000066432 Nop10Q9CQS2 64 aa5.57□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms