RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Ccl21aP84444 133 aa11.53□□□□□ -0.56
Scaf4-201ENSMUST00000039280 Ccl21bP86792 133 aa11.53□□□□□ -0.56
Scaf4-201ENSMUST00000039280 Ccl21cP86793 133 aa11.53□□□□□ -0.56
Scaf4-201ENSMUST00000039280 Gm2564F6Z9S8 108 aa11.53□□□□□ -0.56
Scaf4-201ENSMUST00000039280 Ccl19O70460 108 aa11.53□□□□□ -0.56
Scaf4-201ENSMUST00000039280 P01820 115 aa11.52□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Ighv1-50A0A075B5W1 117 aa11.52□□□□□ -0.57
Scaf4-201ENSMUST00000039280 P01802 115 aa11.52□□□□□ -0.57
Scaf4-201ENSMUST00000039280 PkigO70139 76 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 4930596D02RikQ3V0H9 216 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Ighv1-12A0A0A6YXJ9 117 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Reg3gO09049 174 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 TtrP07309 147 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Olfr313Q5NC55 308 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Odf3l1Q810P2 275 aa11.51□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Cox8cA6H666 72 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm10767Q3TQP0 103 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Hivep3A2A884 2348 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm14137Q8CE97 175 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Map1aQ9QYR6 2776 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Setd2E9Q5F9 2537 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 CirbpP60824 172 aaKnown RBP11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Obox8V9GWY9 217 aa11.5□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Mrps12O35680 139 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 GalmQ8K157 342 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Celsr3Q91ZI0 3301 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Trav3-4A0A075B654 114 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Ighv1-52A0A0A6YXC3 117 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Rpl32-psP17932 135 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Znf239P24399 201 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm1968Q3T9I3 115 aa11.49□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Trav9-2A0A075B647 113 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Trav9-4A0A0B4J1K2 113 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm44965A0A0N4SVR3 59 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Trav4n-4A0A075B615 110 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Sprr3O09116 238 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 H1fxQ80ZM5 188 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Myo18bE9PV66 2605 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm867A0A1W2P7T4 151 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Tmem14cQ9CQN6 114 aa11.48□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm9513B3GLJ6 99 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm17455G3UW87 128 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 C2cd3Q52KB6 2323 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Prelid3aQ8VE85 172 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Tmem101Q91VP7 257 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 B430305J03RikQ8BQQ8 176 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Rpl35aO55142 110 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Chchd5Q9CQP3 110 aa11.47□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm5089A1L3C8 106 aa11.46□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm42674D3YUT9 64 aa11.46□□□□□ -0.57
Scaf4-201ENSMUST00000039280 P01837 106 aa11.46□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Spink10Q8CAC8 162 aa11.46□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Ifi27l2aQ8R412 90 aa11.46□□□□□ -0.57
Scaf4-201ENSMUST00000039280 Gm11020F6ZGD5 61 aa11.46□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Nhlrc1Q8BR37 401 aa11.46□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Gm6793B2RXM2 351 aa11.46□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ndufa4l2Q4FZG9 87 aa11.46□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Synj2bpQ9D6K5 145 aa11.46□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Spink1P09036 80 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Cox6b1P56391 86 aaKnown RBP11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ube2wQ8VDW4 151 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Wdfy4E9Q2M9 3149 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ighv1-53A0A075B5W3 117 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Smim10l1A0A087WNQ7 89 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Atp6v0e2Q91XE7 81 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Rnf185Q91YT2 192 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Foxi2Q3I5G5 311 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Olfr311Q5NC59 308 aa11.45□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Il1f10Q8R459 152 aa11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Phpt1Q9DAK9 124 aa11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Snai3Q9QY31 287 aa11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 BptfA2A654 3036 aaKnown RBP11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Lect2O88803 151 aa11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 4930544G11RikQ9CR99 193 aa11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Prrc2cQ3TLH4 2846 aaKnown RBP11.44□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ighv5-9-1A0A0A6YVS4 126 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Trbv13-1A0A0B4J1P8 112 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 MsmbO08540 113 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 FryE9Q8I9 3020 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ighv2-7A0A075B5Q8 116 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Rtl10D3YWW5 146 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Gm10295Q8CCF3 114 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ndufa3Q9CQ91 84 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Tspan13Q9D8C2 204 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Prrc2aQ7TSC1 2158 aaKnown RBP11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 AW146154Q3TPQ7 468 aa11.43□□□□□ -0.58
Scaf4-201ENSMUST00000039280 PlaurP35456 327 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Defb47Q30KN1 79 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 F11rO88792 300 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 P01786 117 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ss18l2Q9D174 77 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 P18527 97 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Il19Q8CJ70 176 aa11.42□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ebi3O35228 228 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Crip3Q6Q6R3 243 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Bles03Q8VD62 251 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ankrd39Q9D2X0 183 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Zfp462B1AWL2 2495 aaKnown RBP11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 C920008G01RikA0A0B4J1N1 112 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Gm5878E9PUB3 99 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms