RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Ighv1-53A0A075B5W3 117 aa17.81■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Dock9Q8BIK4 2055 aa17.8■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Mapk1ip1lQ8BH93 242 aa17.8■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Igkv1-122A0A140T8M9 119 aa17.8■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm20708H3BKF4 155 aa17.8■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Zmat4Q8BZ94 229 aa17.79■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm10251J3QPM5 127 aa17.79■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm2916Q9D9B9 127 aa17.79■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Adamts9E9PUN6 1931 aa17.79■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Kif26aQ52KG5 1881 aa17.79■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ube2bP63147 152 aa17.78■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Odf3l1Q810P2 275 aa17.78■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm17472A0A075B683 117 aa17.78■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm17359A0A0G2JEB7 487 aa17.78■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 A230072I06RikQ3UUJ8 172 aa17.77■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Klk11Q9QYN3 276 aa17.77■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ighv13-2A0A0A6YWN3 119 aa17.77■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm10518F6UQQ9 182 aa17.77■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Rbx1P62878 108 aa17.77■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 BC107364E9Q5A2 140 aa17.77■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Hoxb4P10284 250 aa17.77■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gm21994F6T2D2 329 aa17.77■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gtf3c1Q8K284 2101 aa17.77■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Wfdc15bQ9JHY4 80 aa17.77■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Trav13n-1A0A0G2JEU8 110 aa17.76■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Prp2P05143 317 aa17.76■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 CrygcQ61597 174 aa17.76■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gm5878E9PUB3 99 aa17.76■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Fam222aQ6PGH4 453 aa17.76■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Igkv8-26A0A075B5N5 123 aa17.75■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 P01658 132 aa17.75■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 4930546C10RikE9Q4Y3 121 aa17.75■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Vwa8Q8CC88 1905 aa17.75■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Cox7b2Q9D2H1 82 aa17.75■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gm19410A0A140LJC7 2098 aa17.74■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gm10553J3QPF1 123 aa17.74■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Odf3Q920N1 254 aa17.74■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Ighv1-75A0A075B5Y2 117 aa17.74■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Spry4Q9WTP2 300 aa17.73■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 CstadQ9D245 104 aa17.73■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gm14137Q8CE97 175 aa17.72■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 MgamB5THE2 1827 aa17.72■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Gm44965A0A0N4SVR3 59 aa17.71■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Ighv1-61P01749 117 aa17.71■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 MyofQ69ZN7 2048 aaKnown RBP17.71■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Fgf6P21658 208 aa17.71■□□□□ 0.43
Sh3rf1-201ENSMUST00000034060 Rp1l1Q8CGM2 1859 aa17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 PrcdQ00LT2 53 aa17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Triap1Q9D8Z2 76 aa17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Dnajc13D4AFX7 2248 aaKnown RBP17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Trav13d-1A0A075B606 110 aa17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Q9D131 166 aa17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Pi4kaE9Q3L2 2105 aa17.7■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Cox7a1P56392 80 aa17.69■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Pkd1l3Q2EG98 2201 aa17.69■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Fam110dQ80X91 271 aa17.69■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Gm9949Q8C9F4 104 aa17.69■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Trav13d-4A0A0G2JFX3 110 aa17.69■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Tcl1b3P56842 122 aa17.68■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Spata25Q9DA57 226 aa17.68■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 P01643 108 aa17.68■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Gm15091B1AZM2 449 aa17.68■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Igkv1-35A0A0G2JDE5 120 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 CrygdP04342 174 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Vpreb1P13372 142 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 AW146154Q3TPQ7 468 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Igkv2-109A0A075B5K6 120 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Col5a3Q9JLI2 1739 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Naa38Q9D2U5 125 aa17.67■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Q9DAQ5 155 aa17.66■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Gm37389A0A0A6YW05 95 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Ighv8-5A0A0A6YY60 119 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 SvipQ3UZP4 77 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Zc2hc1bQ9D534 172 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Gm9958Q8C9U4 106 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 9130230L23RikQ8CC80 163 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Arhgap21Q6DFV3 1944 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Ighv2-7A0A075B5Q8 116 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Zfand3Q497H0 227 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 MsmpB1AWI6 139 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Prop1P97458 223 aa17.65■□□□□ 0.42
Sh3rf1-201ENSMUST00000034060 Igkv8-18A0A0B4J1J3 123 aa17.64■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Wfdc11A2A5H7 82 aa17.64■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 B9d2Q3UK10 175 aa17.64■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Timm17bQ9Z0V7 172 aa17.64■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Rpl39lQ9CQD0 51 aa17.64■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 P06328 117 aa17.63■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Camk2n2Q78WH7 79 aa17.63■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Rai1Q61818 1889 aa17.63■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Gm15557A6PWY0 234 aa17.63■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Trav13n-2A0A0G2JF93 110 aa17.63■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Klk12B2RVZ0 247 aa17.62■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Ros1Q78DX7 2340 aa17.62■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Vpreb3D3Z6J4 130 aa17.62■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 1810032O08RikE9PZV8 113 aa17.61■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Col24a1Q30D77 1733 aa17.61■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Spink4O35679 86 aa17.61■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Ppp1r32Q148A4 427 aa17.6■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Gm17577J3QNF7 156 aa17.6■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Asxl3Q8C4A5 2259 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms