RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm7257D3YX25 99 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Emp2O88662 172 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 P06329 120 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Snx22Q8C084 192 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Tctex1d2Q9CQ66 144 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 PmvkQ9D1G2 192 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Ndufs7Q9DC70 224 aa10.38□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Igkv4-54A0A0G2JES9 117 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Hist1h2bmP10854 126 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Shisal1Q0VBP7 198 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Fgfbp3Q1HCM0 245 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Hist1h2bhQ64478 126 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Hist2h2bbQ64525 126 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Hist1h2bcQ6ZWY9 126 aaKnown RBP10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Dkk2Q9QYZ8 259 aa10.37□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Ighv1-59A0A0A6YXE0 117 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 P01811 117 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Hoxa5P09021 270 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 CebpgP53568 150 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Ppp1r32Q148A4 427 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Sslp1Q3UN54 99 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Olfr983Q8VG90 315 aa10.36□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Igkv4-72A0A0B4J1I4 117 aa10.35□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Atp5g3P56384 141 aa10.35□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Megf9Q8BH27 600 aa10.35□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Gm16223Q8CBM3 117 aa10.35□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Atp5g1Q9CR84 136 aa10.35□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Notch1Q01705 2531 aa10.35□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Rab5bP61021 215 aa10.34□□□□□ -0.75
Ercc1-201ENSMUST00000003645 PdpnQ62011 172 aa10.34□□□□□ -0.75
Ercc1-201ENSMUST00000003645 MrapQ9D159 127 aa10.34□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Igkv4-91A0A075B5L2 119 aa10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gm10322F7D7I4 111 aa10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Mmp23O88676 391 aa10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gm5629P06327 117 aa10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 CirbpP60824 172 aaKnown RBP10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Mrps10Q80ZK0 160 aaKnown RBP10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Ramp1Q9WTJ5 148 aa10.33□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Igkv4-61A0A0G2JH00 117 aa10.32□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Ndufa4Q62425 82 aaKnown RBP10.32□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Ammecr1lQ8JZZ6 310 aa10.32□□□□□ -0.76
Ercc1-201ENSMUST00000003645 AamdcQ8R0P4 122 aa10.32□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Stard4Q99JV5 224 aa10.32□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Snai3Q9QY31 287 aa10.32□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Trav13n-1A0A0G2JEU8 110 aa10.31□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Zfp867E9Q2M4 473 aa10.31□□□□□ -0.76
Ercc1-201ENSMUST00000003645 9130204L05RikG3UWB8 92 aa10.31□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Mllt11P97783 90 aa10.31□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Polr2kQ63871 58 aa10.31□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Trav14n-2A0A0G2JDF5 121 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gm16181B0V2H2 73 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gata1P17679 413 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 TbpP29037 316 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Sumo2P61957 95 aaKnown RBP10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Rpl32P62911 135 aaKnown RBP10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Sdhaf1Q3U276 118 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gm904Q3V2L5 102 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gng7Q61016 68 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Map1lc3aQ91VR7 121 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Chchd1Q9CQA6 118 aa10.3□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Ighv1-85A0A075B5Y6 117 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gm45623A0A1B0GSF6 103 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Gm17430F6RSK3 157 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Spink4O35679 86 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Tma7Q8K003 64 aaKnown RBP10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Olfr1262Q8VGN2 304 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Lyzl4Q9D925 145 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Lamtor2Q9JHS3 125 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 CcsQ9WU84 274 aa10.29□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Trav16d-dv11A0A075B617 117 aa10.28□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Olfr869E9PX82 323 aa10.28□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Leprotl1Q9CQ74 131 aa10.28□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Pradc1Q9D9N8 188 aa10.28□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Mrpl32Q9DCI9 187 aaKnown RBP10.28□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Trav9d-3A0A075B695 113 aa10.27□□□□□ -0.76
Ercc1-201ENSMUST00000003645 AW011738F6S7Q2 159 aa10.27□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Ly6gP35461 111 aa10.27□□□□□ -0.76
Ercc1-201ENSMUST00000003645 9130213A22RikQ3V3T2 120 aa10.27□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Fam19a2Q7TPG7 131 aa10.27□□□□□ -0.76
Ercc1-201ENSMUST00000003645 Pdzd11Q9CZG9 140 aa10.27□□□□□ -0.76
Ercc1-201ENSMUST00000003645 NpwA0A1L1STR8 176 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Umad1E0CX23 159 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Gm5426J3QNM7 103 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 P01736 120 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Fabp4P04117 132 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 NpsP0C0P8 89 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Ube2d3P61079 147 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Ube2d2P62838 147 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Rpl36aP83882 106 aaKnown RBP10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Gm21370Q3T9V6 190 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Tmem101Q91VP7 257 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Nudt3Q9JI46 168 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Klf13Q9JJZ6 289 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Dnah3Q8BW94 4083 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Lgals6O54891 301 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 March3Q8BRX9 218 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Fam241bQ9D882 120 aa10.26□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Trav14-2A0A075B694 121 aa10.25□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Nat8f4G5E8L3 226 aa10.25□□□□□ -0.77
Ercc1-201ENSMUST00000003645 SstP60041 116 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms