RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Erg28Q9ERY9 140 aa11.7□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Abca2P41234 2434 aa11.7□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Hbb-bsA8DUK4 147 aa11.7□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm17430F6RSK3 157 aa11.7□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Hbb-b1P02088 147 aa11.7□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Ndufb4Q9CQC7 129 aa11.7□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Ankhd1E9PUR0 2548 aaKnown RBP11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Fxyd7P59648 80 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Defb18Q30KP5 85 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Wfdc15aQ8BH89 80 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Ighv14-1A0A075B5R4 117 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Igkv4-62A0A0G2JDW9 117 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Lgals6O54891 301 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 P18527 97 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Uqcrfs1Q9CR68 274 aa11.69□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Ighv1-66A0A075B5X5 117 aa11.68□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm10553J3QPF1 123 aa11.68□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm5629P06327 117 aa11.68□□□□□ -0.54
Sdc1-205ENSMUST00000171158 MturnQ8CGA4 131 aa11.68□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Ighv1-52A0A0A6YXC3 117 aa11.67□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm21994F6T2D2 329 aa11.67□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Cited2O35740 269 aa11.67□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Bsph2Q0Q236 131 aa11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Iah1Q9DB29 249 aa11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Bak1O08734 209 aa11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm7489Q3UT34 171 aa11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Prss29Q99MS4 279 aa11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Sorl1O88307 2215 aaKnown RBP11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Usp24B1AY13 2617 aaKnown RBP11.66□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Olfr313Q5NC55 308 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Ovol2Q8CIV7 274 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 LystP97412 3788 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm29289A0A087WPY7 166 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm4064A0A087WR82 380 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Igsf23B2RTN2 239 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm10352B2RWR6 380 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm10271F6WY25 52 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Gm21693J3QK27 380 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Rbmy1a1O35698 380 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 Tal2Q62282 108 aa11.65□□□□□ -0.54
Sdc1-205ENSMUST00000171158 P01812 117 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Rpl32P62911 135 aaKnown RBP11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 1500011B03RikQ3TTH7 73 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Samd5Q3V1H9 173 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Htr1dQ61224 374 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 8030423J24RikQ9CX45 142 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Ighv1-63A0A075B5X2 117 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Trbv13-1A0A0B4J1P8 112 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Brd3osA0A1B0GRB6 84 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Mtatp8P03930 67 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Egr2P08152 470 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Smim1P0C8K7 78 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Ss18Q62280 418 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Tm4sf20Q9CQY8 226 aa11.64□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Rpl36-ps4A0A140T8U4 117 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 C1qcQ02105 246 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Mustn1Q99JI1 82 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Spcs1Q9D958 161 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Trbv17A0A140T8P8 114 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Gm26602M0QWA4 95 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Defa13P50711 93 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Polr2kQ63871 58 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Prr3Q811B5 190 aaKnown RBP11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Pxt1Q8K459 51 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Foxi1Q922I5 372 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Mcrip2Q9CQB2 160 aaKnown RBP11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 PmvkQ9D1G2 192 aa11.63□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Ighv2-3A0A075B696 115 aa11.62□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Trbv16A0A0B4J1H3 115 aa11.62□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Gm20499D3Z4G5 72 aa11.62□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Gphb5Q812B2 130 aa11.62□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Cyyr1Q8VIH7 165 aa11.62□□□□□ -0.55
Sdc1-205ENSMUST00000171158 P01837 106 aa11.61□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Snrpd3P62320 126 aaKnown RBP11.61□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Ighv2-7A0A075B5Q8 116 aa11.61□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Defa34D3Z0J0 93 aa11.61□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Tmem170bP86050 132 aa11.61□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Fam222aQ6PGH4 453 aa11.61□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Cox7cP17665 63 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Cd69P37217 199 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Q9D727 114 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Fam216aQ9DB54 251 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Clec5aQ9R007 190 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 A730046J19RikA0A1B0GSN8 89 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 SbpP15501 199 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Cks1brtQ3UNC9 96 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Lrcol1Q3URS3 161 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 PerpQ9JK95 193 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Ccl24Q9JKC0 119 aa11.6□□□□□ -0.55
Sdc1-205ENSMUST00000171158 OtogO55225 2910 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Csn3P06796 181 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 BC025920Q3US60 128 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 AI854703Q8BIN3 203 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Gm17732E9Q5I2 61 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Tcrg-C3L7N479 172 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 P03985 172 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Pradc1Q9D9N8 188 aa11.59□□□□□ -0.55
Sdc1-205ENSMUST00000171158 Pglyrp1O88593 182 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Rpl39P62892 51 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 4930564D02RikQ9D4S4 103 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms