RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Rpl19P84099 196 aaKnown RBP10.54□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Sfrp2P97299 295 aa10.54□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Olfr313Q5NC55 308 aa10.54□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Ammecr1lQ8JZZ6 310 aa10.54□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Uqcc1Q9CWU6 295 aa10.54□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Tmem88Q9D0N8 159 aa10.54□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Trbv13-2A0A140T8N6 113 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 H2al2bA9Z055 111 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Gm16442D3YZG3 307 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Gm5129F6YHA9 99 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Ins1P01325 108 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Olfr1537P34983 314 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Cd84Q18PI6 329 aa10.53□□□□□ -0.72
Hmgb1-208ENSMUST00000139443 Rhox4gQ2MDF7 205 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Snhg11Q4G0K9 87 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Snx22Q8C084 192 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Oraov1Q8CH62 137 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Mzt2Q9CQ25 159 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Ndufs7Q9DC70 224 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Tcf24V9GWT9 166 aa10.52□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gm2696A0A1W2P709 240 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gm17732E9Q5I2 61 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 CtsgP28293 261 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Nupr2Q497P3 102 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Atp6v0e2Q91XE7 81 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 RetnQ99P87 114 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Fam241aQ9CZL2 131 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Q9D8L0 127 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Kcnip3Q9QXT8 256 aa10.51□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Defa6P50704 93 aa10.5□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gm21370Q3T9V6 190 aa10.5□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 TirapQ99JY1 241 aa10.5□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gkn1Q9CR36 201 aa10.5□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Ighv1-85A0A075B5Y6 117 aa10.49□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Rpl36aP83882 106 aaKnown RBP10.49□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Pmis2Q497Q9 96 aa10.49□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Ndufa4l2Q4FZG9 87 aa10.49□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 4930474N05RikQ8BVR5 218 aa10.49□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Dnah2P0C6F1 4456 aa10.49□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 1700025B11RikA0A087WNZ6 93 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Trav3n-3A0A0G2JEM0 114 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Sub1P11031 127 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 TshbP12656 138 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Apoc3P33622 99 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Cox17P56394 63 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 1500011B03RikQ3TTH7 73 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Khdc1aQ3UWR2 166 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Clec4b2Q67DU8 208 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Derl1Q99J56 251 aa10.48□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Dnah9B1AR51 4484 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Igkv4-91A0A075B5L2 119 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Scgb1b11A0A087WQJ0 93 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Zfp931A2AHM2 298 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Olfr779E9PUS9 130 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Defa30E9QPZ2 93 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 F11rO88792 300 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 PscaP57096 123 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Cacng7P62956 275 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Ctf1Q60753 203 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 SnrpcQ62241 159 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Eif5a2Q8BGY2 153 aaKnown RBP10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 NpbQ8K4P1 119 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Rab4bQ91ZR1 213 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Tctex1d2Q9CQ66 144 aa10.47□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gm5157A0A087WRH8 301 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Nkx6-2D3Z4R4 277 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gm6176J3QK59 301 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Gm4567Q3UTA8 301 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Il1f10Q8R459 152 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 1700029F12RikQ9CRB4 147 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Them7Q9DCP4 223 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Cryba4Q9JJV0 196 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Plekhb2Q9QZC7 221 aa10.46□□□□□ -0.73
Hmgb1-208ENSMUST00000139443 Ighv2-6A0A075B6A7 116 aa10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 A730046J19RikA0A1B0GSN8 89 aa10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Gm10112D3YWP5 117 aa10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Slc17a2Q5SZA1 478 aa10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Kcnip4Q6PHZ8 250 aa10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 ChtopQ9CY57 249 aaKnown RBP10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Atoh7Q9Z2E5 149 aa10.45□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Gm16519F8VQK7 162 aa10.44□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Emp2O88662 172 aa10.44□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Gtsf1lQ9CWD0 151 aa10.44□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Iah1Q9DB29 249 aa10.44□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Ighv1-66A0A075B5X5 117 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Ighv1-49A0A0A6YWX2 117 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Sh2d1aO88890 126 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Gata1P17679 413 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Commd7Q8BG94 200 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 A530064D06RikQ8BNV8 229 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Batf3Q9D275 118 aa10.43□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Stard9Q80TF6 4561 aa10.42□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Igkv4-53A0A0G2JFC6 119 aa10.42□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 E130208F15RikQ3UPV3 143 aa10.42□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Gm5468Q8C3D3 155 aa10.42□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Gm1330D3Z460 184 aa10.41□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Mrps12O35680 139 aa10.41□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Ube2d3P61079 147 aa10.41□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 Ube2d2P62838 147 aa10.41□□□□□ -0.74
Hmgb1-208ENSMUST00000139443 PkiaP63248 76 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms