RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Cox7cP17665 63 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Eml6Q5SQM0 1958 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Xcl1P47993 114 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Ube2e2Q91W82 201 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 SpinklQ8CEK3 90 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 IgipA0A1B0GR74 53 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Olfr312Q7TRZ9 308 aa12.12□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Gm21994F6T2D2 329 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Srsf2Q62093 221 aaKnown RBP12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Ighv1-23A0A0A6YVW3 117 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Ccl21aP84444 133 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Ccl21bP86792 133 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Ccl21cP86793 133 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Tcf24V9GWT9 166 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 HttP42859 3119 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Nbl1Q61477 178 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Foxi1Q922I5 372 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Bex1Q9R224 128 aa12.11□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 P01794 123 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Pet100P0DJE0 76 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Mustn1Q99JI1 82 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Rpl35aO55142 110 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 LeprotO89013 131 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Vwc2lQ505H4 222 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Shisa9Q9CZN4 424 aa12.1□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 P01643 108 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Smim26Q3V460 107 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Igkv1-99F6XWB2 120 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Gm9958Q8C9U4 106 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Ndufa3Q9CQ91 84 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Gm10604Q3V0X7 143 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Socs3O35718 225 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 P04944 107 aa12.09□□□□□ -0.47
Ccdc88b-201ENSMUST00000113440 Gm21060J3KMU4 56 aa12.08□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Sdhaf1Q3U276 118 aa12.08□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Wisp2Q9Z0G4 251 aa12.08□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 BlcapP62951 87 aa12.08□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Defb18Q30KP5 85 aa12.08□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Lypd6Q8BPP5 171 aa12.08□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Tanc2A2A690 1994 aa12.07□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Notch3Q61982 2318 aa12.07□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Gm7102J3QQ10 178 aa12.07□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Pip4p1Q3TWL2 284 aa12.07□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Vmo1Q5SXG7 201 aa12.07□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Tmem14cQ9CQN6 114 aa12.07□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Dido1Q8C9B9 2256 aaKnown RBP12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Tcl1b4P56844 120 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 CrygcQ61597 174 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 A0A286YE02 88 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Lamtor3O88653 124 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Tnfrsf23Q9ER63 176 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Runx1Q03347 451 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Q8R092 253 aa12.06□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Igkv4-62A0A0G2JDW9 117 aa12.05□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 4930447F04RikA2AFR2 126 aa12.05□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Hoxb4P10284 250 aa12.05□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Ccl24Q9JKC0 119 aa12.05□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Ighv1-64A0A075B5X3 117 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Fam216aQ9DB54 251 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Ramp1Q9WTJ5 148 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 SetxA2AKX3 2646 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Gm15557A6PWY0 234 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Gm10553J3QPF1 123 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 MsmbO08540 113 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Gp9O88186 177 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Edn1P22387 202 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 BC048502Q80Y74 154 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Gm20481G3UXK4 153 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Olfr313Q5NC55 308 aa12.04□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Wnk1P83741 2377 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Igkv3-1A0A075B5P1 119 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Ighv5-9-1A0A0A6YVS4 126 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Erdr1J3QMM0 206 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Rasl10aQ8K5A4 203 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Rnf183Q8QZS5 190 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Igkv8-24A0A140T8P5 121 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Ifitm1Q9D103 106 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Fam241bQ9D882 120 aa12.03□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Reg3gO09049 174 aa12.02□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Igkv4-57-1A0A075B5M4 119 aa12.02□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Lect2O88803 151 aa12.02□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 P01739 132 aa12.02□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Gm5941Q497P9 117 aa12.02□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Bub3Q9WVA3 326 aa12.02□□□□□ -0.48
Ccdc88b-201ENSMUST00000113440 Igkv4-53A0A0G2JFC6 119 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Gm9747Q810H1 104 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Gm5468Q8C3D3 155 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Lage3Q9CR70 148 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Igkv3-2A0A075B5P0 119 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Gm15294V9GXA7 121 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Arhgef17Q80U35 2057 aa12.02□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Gm20499D3Z4G5 72 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 NpyP57774 97 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Ubl5Q9EPV8 73 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Ighv1-77A0A0G2JGS9 117 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Gm9513B3GLJ6 99 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Ss18l2Q9D174 77 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Ighv3-1A0A075B5S6 116 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Gm9913Q8BQQ2 135 aa12.01□□□□□ -0.49
Ccdc88b-201ENSMUST00000113440 Smim10l1A0A087WNQ7 89 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms