RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gm14401A2ARV7 303 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Defb41Q30KP6 65 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm815Q3UWS2 115 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ly6eQ64253 130 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Tnfsf18Q7TS55 173 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Card19Q9D1I2 183 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Nup214Q80U93 2085 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Trav6-6A0A075B603 114 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm6217A0A1Y7VJK9 128 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P04944 107 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 DscamQ9ERC8 2013 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Igkv4-86A0A0G2JGE7 114 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P04213 122 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Igfbpl1Q80W15 270 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Kiaa1549Q68FD9 1940 aa6.49□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Muc2Q80Z19 2680 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Zfp938E9Q9G3 579 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Oosp3G5E8D7 195 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Defb43Q30KM9 69 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Crebl2Q32M00 123 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Depp1Q8K2F3 205 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 1700010B08RikQ9DAI7 102 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Klf5Q9Z0Z7 446 aaKnown RBP6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ighv7-1A0A075B5S2 121 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm20422E9PUR3 255 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gp9O88186 177 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P18524 117 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ccl21aP84444 133 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Spink13Q3UTS8 97 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Cd200r3Q5UKY4 296 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Nup37Q9CWU9 326 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Srp19Q9D7A6 144 aa6.48□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Trav6-4A0A075B6B4 115 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm14412A2ARR7 526 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm5239D3YYZ2 122 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 NpsP0C0P8 89 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Defa21Q8C1P2 93 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Rspo1Q9Z132 265 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ube2aQ9Z255 152 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Col7a1Q63870 2944 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Pcnx1Q9QYC1 2344 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ighv12-3A0A075B5T1 117 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Tex38A2A8T7 201 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm20481G3UXK4 153 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P01746 140 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Zfp11P10751 647 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Srrm4Q8BKA3 608 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm10762Q9CZN6 115 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ccl28Q9JIL2 130 aa6.47□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Krtap16-1A2A5X5 502 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Il13P20109 131 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Prr9Q8BV84 116 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm9936Q8C864 160 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Timm21Q8CCM6 249 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Wfdc2Q9DAU7 174 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Pkd1l3Q2EG98 2201 aa6.46□□□□□ -1.38
Upf3b-201ENSMUST00000076265 P01638 115 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm5615Q3UW02 101 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 OstcQ78XF5 149 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Tomm6Q9CQN3 74 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Phpt1Q9DAK9 124 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 IcosQ9WVS0 200 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 TrrapQ80YV3 2565 aaKnown RBP6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ash1lQ99MY8 2958 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ighv8-11A0A075B5X4 119 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Olfr877Q8VF62 311 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Spata25Q9DA57 226 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Cacna1iE9Q7P2 2199 aa6.45□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ccl25O35903 144 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Tmem223Q9CQE2 199 aaKnown RBP6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ufsp1Q9CZP0 217 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gtsf1Q9DAN6 167 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Slc25a20Q9Z2Z6 301 aaKnown RBP6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Nbeal1E9PYP2 2688 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm19410A0A140LJC7 2098 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ighv5-17A0A075B5R1 117 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ighv8-2A0A0A6YW58 119 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Igkv4-50A0A0B4J1J0 117 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm6710A2ART0 554 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 E030018B13RikJ3QMS9 113 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 SnurfQ9WU12 71 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 PtprsB0V2N1 1907 aa6.44□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ighv3-4A0A0A6YXF1 117 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ube2dnl1A2AFH1 155 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gfi1bO70237 330 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm5153P01627 120 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Ighv3-6P18531 116 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Fhl1P97447 280 aaKnown RBP6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Q32M26 199 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Rhox10Q4TU83 196 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Rif1Q6PR54 2419 aaKnown RBP6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 2200002J24RikQ9D807 110 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Akap13E9Q394 2776 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 FlnbQ80X90 2602 aaKnown RBP6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Trdv5A0A075B661 115 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Igkv12-38A0A0G2JEI7 115 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm9767G3X930 207 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Defb33Q30KN3 62 aa6.43□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Abca12E9Q876 2595 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Asxl3Q8C4A5 2259 aa6.42□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 93.4 ms