RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 CckP09240 115 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Samd5Q3V1H9 173 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Gm9961Q8BNV2 113 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Nhlrc1Q8BR37 401 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Pla2g2dQ9WVF6 144 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Rpl13aP19253 203 aaKnown RBP11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Mllt11P97783 90 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Stpg1Q9D2F5 341 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Rab37Q9JKM7 223 aa11.21□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Nat8b-psE0CYC6 232 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Odf1Q61999 247 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Zzef1Q5SSH7 2924 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Igkv20-101-2A0A0G2JDU3 113 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Wfdc11A2A5H7 82 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 1700020N15RikL7MTX3 112 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Hist1h1tQ07133 208 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 ElaneQ3UP87 265 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Nbl1Q61477 178 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Dmrt3Q80WT2 476 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 ApomQ9Z1R3 190 aa11.2□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 2310009B15RikA0A0A6YWI4 143 aa11.19□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Igkv4-70A0A0B4J1I5 116 aa11.19□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Egr2P08152 470 aa11.19□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Spint3Q3UW09 88 aa11.19□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Ighv1-74A0A0G2JGK2 117 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Esp24A8R0V6 68 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Ang5Q5GAN1 145 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Ifi27l2aQ8R412 90 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Arl3Q9WUL7 182 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 AcacaQ5SWU9 2345 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Trbv13-1A0A0B4J1P8 112 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 NpwA0A1L1STR8 176 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Socs3O35718 225 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Q5BN45 167 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Hes7Q8BKT2 225 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Atp5lQ9CPQ8 103 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 SNORCQ9CXL7 121 aa11.18□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Tmem262D3Z338 116 aa11.17□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Gm28044L7N1X0 119 aa11.17□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Rpl39P62892 51 aa11.17□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Klk7Q91VE3 249 aa11.17□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Ighv1-82A0A0G2JEU7 117 aa11.17□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Defb30Q30KN4 75 aa11.17□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Lgals4Q8K419 326 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Dpm3Q9D1Q4 92 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Sptbn2Q68FG2 2388 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Ighv1-75A0A075B5Y2 117 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Gm933J3QPC1 141 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Q4KKZ1 196 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Q9DAB9 146 aa11.16□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Smg1Q8BKX6 3658 aaKnown RBP11.15□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Gm2564F6Z9S8 108 aa11.15□□□□□ -0.62
Ushbp1-201ENSMUST00000049184 Igkv4-74A0A0B4J1I3 119 aa11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 C920008G01RikA0A0B4J1N1 112 aa11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Ccl19O70460 108 aa11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Tmem213Q08EA8 116 aa11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Morn5Q9DAI9 170 aa11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Q9DAQ5 155 aa11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Crip2Q9DCT8 208 aaKnown RBP11.15□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Cnot1Q6ZQ08 2375 aaKnown RBP11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Ighv3-3A0A0A6YWL2 116 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 P01747 120 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 BC025920Q3US60 128 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Igkv4-57-1A0A075B5M4 119 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Hoxd3P09027 433 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 PmvkQ9D1G2 192 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Iah1Q9DB29 249 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Phlda3Q9WV95 125 aa11.14□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Polr2kQ63871 58 aa11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 E130116L18RikQ8BMV6 101 aa11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Ifitm10Q8BR26 201 aa11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Wipf1Q8K1I7 493 aa11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Cxcl14Q9WUQ5 99 aa11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Nsun4C4P6S0 806 aaKnown RBP11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Gm10135F6TEE5 83 aa11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Rpl32P62911 135 aaKnown RBP11.13□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Gvin1Q80SU7 2427 aa11.12□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Trbv17A0A140T8P8 114 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 P01739 132 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Gm35549A0A0N4SUS7 141 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Gm11444F6QMA6 170 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 BC106179Q8C9L1 186 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Rpl11Q9CXW4 178 aaKnown RBP11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Lyzl4Q9D925 145 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Dopey1Q8BL99 2399 aa11.11□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 ColqO35348 457 aa11.1□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 F11rO88792 300 aa11.1□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 P01643 108 aa11.1□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 P06328 117 aa11.1□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Lyrm7Q9DA03 104 aa11.1□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Ighv1-66A0A075B5X5 117 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Gm28539A0A087WSL9 92 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 P01811 117 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Rpl32-psP17932 135 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Defb47Q30KN1 79 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Trav7d-3Q5R1I1 112 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Tmem219Q9D123 240 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 Timm17aQ9Z0V8 171 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 4930596D02RikQ3V0H9 216 aa11.09□□□□□ -0.63
Ushbp1-201ENSMUST00000049184 FshbQ60687 130 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms