RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Ighv1-4A0A075B5T4 117 aa14.38□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Defb47Q30KN1 79 aa14.38□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Trbv13-1A0A0B4J1P8 112 aa14.38□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Spink10Q8CAC8 162 aa14.38□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Synj2bpQ9D6K5 145 aa14.38□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Bub3Q9WVA3 326 aa14.38□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Hoxd3P09027 433 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Defa4P28311 92 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Rmi2Q3UPE3 149 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Ighv1-50A0A075B5W1 117 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Edn1P22387 202 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 DysfQ9ESD7 2090 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Nup210Q9QY81 1886 aaKnown RBP14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Foxi2Q3I5G5 311 aa14.37□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Gm20730A0A075B5J6 119 aa14.36□□□□□ -0.11
Ebf3-201ENSMUST00000033378 7420426K07RikQ3UX66 186 aa14.36□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Taf15Q8BQ46 557 aaKnown RBP14.36□□□□□ -0.11
Ebf3-201ENSMUST00000033378 P01738 130 aa14.36□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Gm9961Q8BNV2 113 aa14.36□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Arhgef17Q80U35 2057 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Socs3O35718 225 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Tmem263Q9DAM7 115 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 P01750 117 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Spink12Q9D256 87 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Gm17455G3UW87 128 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 P01786 117 aa14.35□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Defb26Q30KN7 186 aa14.34□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Prop1P97458 223 aa14.34□□□□□ -0.11
Ebf3-201ENSMUST00000033378 March3Q8BRX9 218 aa14.34□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Gm15217A2CG07 155 aa14.34□□□□□ -0.11
Ebf3-201ENSMUST00000033378 BC107364E9Q5A2 140 aa14.34□□□□□ -0.11
Ebf3-201ENSMUST00000033378 C920008G01RikA0A0B4J1N1 112 aa14.33□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Cox6b1P56391 86 aaKnown RBP14.33□□□□□ -0.11
Ebf3-201ENSMUST00000033378 Sorl1O88307 2215 aaKnown RBP14.33□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Sfta2E9PXB6 77 aa14.33□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Reg3gO09049 174 aa14.33□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Zmat4Q8BZ94 229 aa14.33□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Igkv4-53A0A0G2JFC6 119 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 P01896 185 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Nbl1Q61477 178 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Cmc4Q61908 68 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Lamtor3O88653 124 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 PpdpfQ9CR37 115 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Piezo2Q8CD54 2822 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Ighv5-9-1A0A0A6YVS4 126 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Igkv6-13A0A0G2JGY3 119 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Ifitm1Q9D103 106 aa14.32□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Trav9d-4A0A0G2JG37 103 aa14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Vmo1Q5SXG7 201 aa14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Rbmy1bQ60990 380 aa14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Srsf2Q62093 221 aaKnown RBP14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Defa21Q8C1P2 93 aa14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Rif1Q6PR54 2419 aaKnown RBP14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Rpl39P62892 51 aa14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Q9D131 166 aa14.31□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Morn5Q9DAI9 170 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Igkv4-57-1A0A075B5M4 119 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Lyzl4Q9D925 145 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 NbasE9Q411 2356 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Wfdc11A2A5H7 82 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Znf672Q99LH4 468 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Igkv4-68A0A0B4J1I7 117 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Vsig4F6TUL9 280 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Ndufa1O35683 70 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Defb29Q8BGW9 78 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Leap2Q91V13 76 aa14.3□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Ighv1-58A0A075B5W9 117 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Pglyrp4Q0VB07 374 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 E130218I03RikA0A0U1RNU5 63 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Gm42674D3YUT9 64 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 P01837 106 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Egr2P08152 470 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Mapk1ip1lQ8BH93 242 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Smim10l1A0A087WNQ7 89 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Gm7257D3YX25 99 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Gm10553J3QPF1 123 aa14.29□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Igkv8-24A0A140T8P5 121 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Prp2P05143 317 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 BB014433Q8C5R5 389 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Ighv2-6A0A075B6A7 116 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Vwc2lQ505H4 222 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Fam24aQ8CF27 98 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 E030018B13RikJ3QMS9 113 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Lypd6Q8BPP5 171 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Mpv17l2Q8VIK2 200 aa14.28□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Samd13D3YUG0 102 aa14.27□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Ss18l2Q9D174 77 aa14.27□□□□□ -0.12
Ebf3-201ENSMUST00000033378 Map6d1Q14BB9 191 aa14.27□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Ndufa12Q7TMF3 145 aaKnown RBP14.27□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Lage3Q9CR70 148 aa14.27□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Wfdc15bQ9JHY4 80 aa14.27□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Dido1Q8C9B9 2256 aaKnown RBP14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Ighv1-12A0A0A6YXJ9 117 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Edn3P48299 214 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 B230307C23RikQ8BLB2 64 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 MplkipQ9D011 178 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Eml6Q5SQM0 1958 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 OdaphJ3QNT8 126 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 5730522E02RikQ5SP45 163 aa14.26□□□□□ -0.13
Ebf3-201ENSMUST00000033378 Tcf20Q9EPQ8 1987 aa14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms