RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Arhgap21Q6DFV3 1944 aa11.03□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ccl25O35903 144 aa11.02□□□□□ -0.64
Col1a1-201ENSMUST00000001547 NpsP0C0P8 89 aa11.02□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm17455G3UW87 128 aa11.02□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Tomm6Q9CQN3 74 aa11.02□□□□□ -0.65
Col1a1-201ENSMUST00000001547 4930447F04RikA2AFR2 126 aa11.02□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Cd24P24807 76 aa11.02□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Rbmy1bQ60990 380 aa11.02□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Ccl24Q9JKC0 119 aa11.02□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Nup210Q9QY81 1886 aaKnown RBP11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Gm15217A2CG07 155 aa11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Nxph4G3X9N5 304 aa11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Tcf20Q9EPQ8 1987 aa11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Brk1Q91VR8 75 aa11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Tnfrsf23Q9ER63 176 aa11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Pla2g2aP31482 146 aa11.01□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Ube2bP63147 152 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 A230072I06RikQ3UUJ8 172 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Ighv13-2A0A0A6YWN3 119 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 SelenowP63300 88 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Parp4E9PYK3 1969 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Ighv8-8A0A0A6YXQ0 119 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Olfr313Q5NC55 308 aa11□□□□□ -0.65
Col1a1-201ENSMUST00000001547 P01739 132 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Plxnb3Q9QY40 1902 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Igkv1-122A0A140T8M9 119 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Gm10638F6QEG2 257 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 MifP34884 115 aaKnown RBP10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Dand5Q76LW6 185 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Tmem14cQ9CQN6 114 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 BC048562Q80ZQ7 204 aa10.99□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Gm20730A0A075B5J6 119 aa10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Ighv1-50A0A075B5W1 117 aa10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 P06330 118 aa10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Dmrtc1c1Q9D410 238 aa10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Sptan1P16546 2472 aaKnown RBP10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 P01791 123 aa10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Greb1Q3UHK3 1954 aa10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Nsun4C4P6S0 806 aaKnown RBP10.98□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Abca1P41233 2261 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Klk11Q9QYN3 276 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Med12A2AGH6 2190 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Spag11Q8K4N2 71 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Gm11733Q8BQP1 125 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Gm20499D3Z4G5 72 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Ifitm1Q9D103 106 aa10.97□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Defb47Q30KN1 79 aa10.96□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Sdk2Q6V4S5 2176 aa10.96□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Rp1l1Q8CGM2 1859 aa10.96□□□□□ -0.65
Col1a1-201ENSMUST00000001547 P01643 108 aa10.96□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Defb18Q30KP5 85 aa10.96□□□□□ -0.65
Col1a1-201ENSMUST00000001547 Igkv8-26A0A075B5N5 123 aa10.96□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Gm10251J3QPM5 127 aa10.96□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ly6g5bQ8K1T4 194 aa10.96□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Gm2916Q9D9B9 127 aa10.96□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Nbl1Q61477 178 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ndufa1O35683 70 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Slc25a29Q8BL03 306 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ighv1-52A0A0A6YXC3 117 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Prop1P97458 223 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Srsf2Q62093 221 aaKnown RBP10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Znrf2Q71FD5 238 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 9230109A22RikQ8BHE6 111 aa10.95□□□□□ -0.66
Col1a1-201ENSMUST00000001547 P04943 107 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Col8a2P25318 699 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 NpbQ8K4P1 119 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 CenpeQ6RT24 2474 aaKnown RBP10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ighv1-62-2A0A0A6YXZ4 119 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Gm10553J3QPF1 123 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Gm5941Q497P9 117 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Olfr311Q5NC59 308 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Trav12-3A0A075B648 115 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 E030018B13RikJ3QMS9 113 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ang4Q3TMQ6 144 aa10.94□□□□□ -0.66
Col1a1-201ENSMUST00000001547 FancmQ8BGE5 2021 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ighv1-77A0A0G2JGS9 117 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Mrps12O35680 139 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Hoxb4P10284 250 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Map6d1Q14BB9 191 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 P01750 117 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Defb12Q8K4N3 78 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Prh1P05142 261 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 AtrxQ61687 2476 aaKnown RBP10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 9130230L23RikQ8CC80 163 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Ociad2Q9D8W7 154 aa10.93□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Trbv14A0A140T8L9 115 aa10.92□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Spink4O35679 86 aa10.92□□□□□ -0.66
Col1a1-201ENSMUST00000001547 P01837 106 aa10.92□□□□□ -0.66
Col1a1-201ENSMUST00000001547 UrahQ9CRB3 118 aa10.92□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Sec16aA2AIX1 2377 aa10.92□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Nop10Q9CQS2 64 aa10.92□□□□□ -0.66
Col1a1-201ENSMUST00000001547 BlcapP62951 87 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Dennd4cA6H8H2 1906 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Lst1O08843 95 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Trav9-2A0A075B647 113 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Trav9-4A0A0B4J1K2 113 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Gp9O88186 177 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Trav6n-6A0A075B6B2 114 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Gm9949Q8C9F4 104 aa10.91□□□□□ -0.66
Col1a1-201ENSMUST00000001547 Bub3Q9WVA3 326 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 75.9 ms