RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W GPI10P30777 616 aa6.65□□□□□ -1.34
CTF19YPL018W NFU1P32860 256 aa6.65□□□□□ -1.34
CTF19YPL018W RRP14P36080 434 aaKnown RBP6.65□□□□□ -1.34
CTF19YPL018W ECM13P38195 257 aa6.65□□□□□ -1.34
CTF19YPL018W SAF1P38352 637 aa6.65□□□□□ -1.34
CTF19YPL018W AIM18P38884 321 aa6.65□□□□□ -1.34
CTF19YPL018W INA22P40576 216 aa6.65□□□□□ -1.34
CTF19YPL018W YNL320WP42840 284 aa6.65□□□□□ -1.34
CTF19YPL018W BST1P43571 1029 aa6.65□□□□□ -1.34
CTF19YPL018W MIC19P43594 170 aa6.65□□□□□ -1.34
CTF19YPL018W RTT101P47050 842 aa6.65□□□□□ -1.34
CTF19YPL018W COQ6P53318 479 aa6.65□□□□□ -1.34
CTF19YPL018W RPL34AP87262 121 aaPredicted RBP6.65□□□□□ -1.34
CTF19YPL018W BSP1Q06604 576 aa6.65□□□□□ -1.34
CTF19YPL018W YDL121CQ07541 149 aa6.65□□□□□ -1.34
CTF19YPL018W YLL056CQ12177 298 aa6.65□□□□□ -1.34
CTF19YPL018W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
CTF19YPL018W RRD2Q12461 358 aa6.65□□□□□ -1.34
CTF19YPL018W MGT1P26188 188 aa6.64□□□□□ -1.35
CTF19YPL018W CDC3P32457 520 aaKnown RBP6.64□□□□□ -1.35
CTF19YPL018W SEC6P32844 805 aa6.64□□□□□ -1.35
CTF19YPL018W RPC37P36121 282 aa6.64□□□□□ -1.35
CTF19YPL018W SPP381P38282 291 aaPredicted RBP6.64□□□□□ -1.35
CTF19YPL018W ATG12P38316 186 aa6.64□□□□□ -1.35
CTF19YPL018W OTU2P38747 307 aaKnown RBP6.64□□□□□ -1.35
CTF19YPL018W CKB2P38930 258 aa6.64□□□□□ -1.35
CTF19YPL018W YEL028WP39989 153 aa6.64□□□□□ -1.35
CTF19YPL018W EDC3P39998 551 aaKnown RBP6.64□□□□□ -1.35
CTF19YPL018W YIL161WP40449 235 aaKnown RBP6.64□□□□□ -1.35
CTF19YPL018W RPL34BP40525 121 aaKnown RBP6.64□□□□□ -1.35
CTF19YPL018W YJL132WP47014 750 aa6.64□□□□□ -1.35
CTF19YPL018W RSM26P47141 266 aa6.64□□□□□ -1.35
CTF19YPL018W TCB2P48231 1178 aa6.64□□□□□ -1.35
CTF19YPL018W PRP24P49960 444 aaKnown RBP6.64□□□□□ -1.35
CTF19YPL018W KXD1P53158 218 aa6.64□□□□□ -1.35
CTF19YPL018W RNH70P53331 553 aa6.64□□□□□ -1.35
CTF19YPL018W TRM112P53738 135 aaPredicted RBP6.64□□□□□ -1.35
CTF19YPL018W VPS9P54787 451 aa6.64□□□□□ -1.35
CTF19YPL018W PIR3Q03180 325 aa6.64□□□□□ -1.35
CTF19YPL018W TLG1Q03322 224 aa6.64□□□□□ -1.35
CTF19YPL018W LCB4Q12246 624 aa6.64□□□□□ -1.35
CTF19YPL018W GPM3Q12326 303 aa6.64□□□□□ -1.35
CTF19YPL018W YDR034W-BQ6Q5X2 51 aa6.64□□□□□ -1.35
CTF19YPL018W QCR6P00127 147 aa6.63□□□□□ -1.35
CTF19YPL018W PPH22P23595 377 aa6.63□□□□□ -1.35
CTF19YPL018W PLC1P32383 869 aa6.63□□□□□ -1.35
CTF19YPL018W RAD5P32849 1169 aaPredicted RBP6.63□□□□□ -1.35
CTF19YPL018W SGE1P33335 543 aa6.63□□□□□ -1.35
CTF19YPL018W DUG2P38149 878 aa6.63□□□□□ -1.35
CTF19YPL018W YBP1P38315 674 aa6.63□□□□□ -1.35
CTF19YPL018W RPS10BP46784 105 aaKnown RBP6.63□□□□□ -1.35
CTF19YPL018W RIM21P48565 533 aa6.63□□□□□ -1.35
CTF19YPL018W TAN1P53072 289 aaPredicted RBP6.63□□□□□ -1.35
CTF19YPL018W PCL10P53124 433 aa6.63□□□□□ -1.35
CTF19YPL018W CPR6P53691 371 aaKnown RBP6.63□□□□□ -1.35
CTF19YPL018W COG6P53959 839 aa6.63□□□□□ -1.35
CTF19YPL018W RPL22BP56628 122 aaKnown RBP6.63□□□□□ -1.35
CTF19YPL018W LEE1Q02799 301 aaKnown RBP6.63□□□□□ -1.35
CTF19YPL018W YPR084WQ06821 456 aa6.63□□□□□ -1.35
CTF19YPL018W AAD15Q08361 143 aa6.63□□□□□ -1.35
CTF19YPL018W RPS10AQ08745 105 aaPredicted RBP6.63□□□□□ -1.35
CTF19YPL018W YOR387CQ08910 206 aa6.63□□□□□ -1.35
CTF19YPL018W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
CTF19YPL018W AI5_ALPHAQ9ZZX1 630 aa6.63□□□□□ -1.35
CTF19YPL018W UBR2Q07963 1872 aa6.62□□□□□ -1.35
CTF19YPL018W CMD1P06787 147 aaKnown RBP6.62□□□□□ -1.35
CTF19YPL018W GCR1P07261 785 aa6.62□□□□□ -1.35
CTF19YPL018W YML002WP0CF17 737 aa6.62□□□□□ -1.35
CTF19YPL018W CBF1P17106 351 aa6.62□□□□□ -1.35
CTF19YPL018W ISF1P32488 338 aa6.62□□□□□ -1.35
CTF19YPL018W AIM26P32858 118 aa6.62□□□□□ -1.35
CTF19YPL018W MRS6P32864 603 aaKnown RBP6.62□□□□□ -1.35
CTF19YPL018W COY1P34237 679 aa6.62□□□□□ -1.35
CTF19YPL018W ADD66P36040 267 aa6.62□□□□□ -1.35
CTF19YPL018W SRP68P38687 599 aaKnown RBP6.62□□□□□ -1.35
CTF19YPL018W VAC8P39968 578 aa6.62□□□□□ -1.35
CTF19YPL018W SCC4P40090 624 aa6.62□□□□□ -1.35
CTF19YPL018W ATM1P40416 690 aa6.62□□□□□ -1.35
CTF19YPL018W UBP7P40453 1071 aa6.62□□□□□ -1.35
CTF19YPL018W MND2P40577 368 aa6.62□□□□□ -1.35
CTF19YPL018W LSB6P42951 607 aa6.62□□□□□ -1.35
CTF19YPL018W TOF2Q02208 771 aa6.62□□□□□ -1.35
CTF19YPL018W ADI1Q03677 179 aa6.62□□□□□ -1.35
CTF19YPL018W INP2Q03824 705 aa6.62□□□□□ -1.35
CTF19YPL018W MRX10Q05648 414 aa6.62□□□□□ -1.35
CTF19YPL018W ECM38Q05902 660 aaPredicted RBP6.62□□□□□ -1.35
CTF19YPL018W GRX8Q05926 109 aa6.62□□□□□ -1.35
CTF19YPL018W YCS4Q06156 1176 aa6.62□□□□□ -1.35
CTF19YPL018W SWC7Q06707 132 aa6.62□□□□□ -1.35
CTF19YPL018W NRT1Q08485 598 aa6.62□□□□□ -1.35
CTF19YPL018W PEP5P12868 1029 aa6.61□□□□□ -1.35
CTF19YPL018W MET22P32179 357 aa6.61□□□□□ -1.35
CTF19YPL018W LTV1P34078 463 aa6.61□□□□□ -1.35
CTF19YPL018W KES1P35844 434 aaKnown RBP6.61□□□□□ -1.35
CTF19YPL018W PPE1P38796 400 aa6.61□□□□□ -1.35
CTF19YPL018W ROK1P45818 564 aaPredicted RBP6.61□□□□□ -1.35
CTF19YPL018W SNG1P46950 547 aa6.61□□□□□ -1.35
CTF19YPL018W TRF5P48561 642 aaKnown RBP6.61□□□□□ -1.35
CTF19YPL018W MRX6P48564 524 aa6.61□□□□□ -1.35
CTF19YPL018W NRD1P53617 575 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms