RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	MRD1	Q06106	887 aa	Known RBP	4.25	□□□□□ -1.73
GCD1	YOR260W	RPO31	P04051	1460 aa		4.25	□□□□□ -1.73
GCD1	YOR260W	STF1	P01098	86 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	MRP7	P12687	371 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	FUR1	P18562	216 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	MVD1	P32377	396 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	TEF4	P36008	412 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	MIC60	P36112	540 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	YHR131C	P38835	850 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	YHR202W	P38887	602 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	AXL1	P40851	1208 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	NIT2	P47016	307 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	IML2	P47031	731 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	VID30	P53076	958 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	MNP1	P53163	194 aa	Predicted RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	HOP2	P53187	214 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	NNF2	P53253	936 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	ERV25	P54837	211 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	SNZ1	Q03148	297 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	GGA1	Q06336	557 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	PHO92	Q06390	306 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	TY2B-B	Q12491	1770 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	SNQ2	P32568	1501 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	YCF1	P39109	1515 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	TOP2	P06786	1428 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	KAR3	P17119	729 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	RPB4	P20433	221 aa	Predicted RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	SUI2	P20459	304 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	RNR1	P21524	888 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	NPL6	P32832	435 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	CUE2	P36075	443 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	SFB3	P38810	929 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	PEX18	P38855	283 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
GCD1	YOR260W	LTP1	P40347	161 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	TAH11	P47112	604 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	RBG2	P53295	368 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	HST1	P53685	503 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	DSL1	P53847	754 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	MRPL19	P53875	158 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	UTP21	Q06078	939 aa	Predicted RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
GCD1	YOR260W	RPS21B	Q3E754	87 aa	Known RBP	4.24	□□□□□ -1.73
GCD1	YOR260W	ECM3	Q99252	613 aa		4.24	□□□□□ -1.73
GCD1	YOR260W	HCA4	P20448	770 aa	Known RBP	4.23	□□□□□ -1.73
GCD1	YOR260W	LCB1	P25045	558 aa	Known RBP	4.23	□□□□□ -1.73
GCD1	YOR260W	DAL3	P32459	195 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	APN2	P38207	520 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	BEM4	P39011	633 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	SPC72	P39723	622 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	IMA5	P40884	581 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	QRI7	P43122	407 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	RMD8	P43620	662 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	NOP9	P47077	666 aa	Known RBP	4.23	□□□□□ -1.73
GCD1	YOR260W	REC102	Q02721	264 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	PNG1	Q02890	363 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	YDR131C	Q03899	556 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	SYF1	Q04048	859 aa	Predicted RBP	4.23	□□□□□ -1.73
GCD1	YOR260W	RRB1	Q04225	511 aa	Known RBP	4.23	□□□□□ -1.73
GCD1	YOR260W	HFD1	Q04458	532 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	YLR345W	Q06137	509 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	YDL073W	Q07454	984 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	KEL3	Q08979	651 aa	Predicted RBP	4.23	□□□□□ -1.73
GCD1	YOR260W	NFI1	Q12216	726 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	TAF3	Q12297	353 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	APC2	Q12440	853 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	SMC4	Q12267	1418 aa		4.23	□□□□□ -1.73
GCD1	YOR260W	IKI3	Q06706	1349 aa	Known RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	STH1	P32597	1359 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	PDR15	Q04182	1529 aa	Known RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	CMK1	P27466	446 aa	Known RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	PAH1	P32567	862 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	KDX1	P36005	433 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	TDA3	P38758	523 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	YJL206C	P39529	758 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	NOP16	P40007	231 aa	Known RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	NDC80	P40460	691 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	CCT7	P42943	550 aa	Known RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	MAD3	P47074	515 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	COX18	P53239	316 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	FHN1	P53279	174 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	YGR266W	P53326	701 aa		4.22	□□□□□ -1.73
GCD1	YOR260W	PAP2	P53632	584 aa	Known RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	YMR111C	Q04461	462 aa	Predicted RBP	4.22	□□□□□ -1.73
GCD1	YOR260W	RPB2	P08518	1224 aa	Known RBP	4.21	□□□□□ -1.73
GCD1	YOR260W	PMS1	P14242	873 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	PDX1	P16451	410 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	OM45	P16547	393 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	THR1	P17423	357 aa	Known RBP	4.21	□□□□□ -1.73
GCD1	YOR260W	CLN1	P20437	546 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	DMC1	P25453	334 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
GCD1	YOR260W	COY1	P34237	679 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	PHO11	P35842	467 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	RFC1	P38630	861 aa	Known RBP	4.21	□□□□□ -1.73
GCD1	YOR260W	PHO12	P38693	467 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	NAS2	P40555	220 aa		4.21	□□□□□ -1.73
GCD1	YOR260W	DUG1	P43616	481 aa	Known RBP	4.21	□□□□□ -1.73
GCD1	YOR260W	AIP1	P46680	615 aa	Known RBP	4.21	□□□□□ -1.73
GCD1	YOR260W	POL31	P46957	487 aa		4.21	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms