RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C CMK1P27466 446 aaKnown RBP9.62□□□□□ -0.87
SPT20YOL148C SEC1P30619 724 aaKnown RBP9.62□□□□□ -0.87
SPT20YOL148C HCS1P34243 683 aa9.62□□□□□ -0.87
SPT20YOL148C STV1P37296 890 aa9.62□□□□□ -0.87
SPT20YOL148C PHO89P38361 574 aa9.62□□□□□ -0.87
SPT20YOL148C BZZ1P38822 633 aa9.62□□□□□ -0.87
SPT20YOL148C IRC6P43615 237 aa9.62□□□□□ -0.87
SPT20YOL148C GLG2P47011 380 aa9.62□□□□□ -0.87
SPT20YOL148C ORC4P54791 529 aa9.62□□□□□ -0.87
SPT20YOL148C THI7Q05998 598 aa9.62□□□□□ -0.87
SPT20YOL148C LDB17Q12342 491 aa9.62□□□□□ -0.87
SPT20YOL148C CAR1P00812 333 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C SLY1P22213 666 aa9.61□□□□□ -0.87
SPT20YOL148C SPB1P25582 841 aaPredicted RBP9.61□□□□□ -0.87
SPT20YOL148C NUP2P32499 720 aa9.61□□□□□ -0.87
SPT20YOL148C YSC83P32792 385 aa9.61□□□□□ -0.87
SPT20YOL148C SKG6P32900 734 aaPredicted RBP9.61□□□□□ -0.87
SPT20YOL148C MRX3P38172 270 aa9.61□□□□□ -0.87
SPT20YOL148C RFS1P38234 210 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C PAC11P40960 533 aa9.61□□□□□ -0.87
SPT20YOL148C RRN7P40992 514 aa9.61□□□□□ -0.87
SPT20YOL148C GCV2P49095 1034 aa9.61□□□□□ -0.87
SPT20YOL148C ARK1P53974 638 aa9.61□□□□□ -0.87
SPT20YOL148C NOG1Q02892 647 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C DML1Q03652 475 aa9.61□□□□□ -0.87
SPT20YOL148C BRE4Q07660 1125 aa9.61□□□□□ -0.87
SPT20YOL148C RSB1Q08417 382 aa9.61□□□□□ -0.87
SPT20YOL148C FKS1P38631 1876 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C BI2P03873 423 aa9.61□□□□□ -0.87
SPT20YOL148C BI4P03879 638 aa9.61□□□□□ -0.87
SPT20YOL148C HIS3P06633 220 aa9.61□□□□□ -0.87
SPT20YOL148C IMA3P0CW40 589 aa9.61□□□□□ -0.87
SPT20YOL148C IMA4P0CW41 589 aa9.61□□□□□ -0.87
SPT20YOL148C FBA1P14540 359 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C PAT1P25644 796 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C ATP7P30902 174 aa9.61□□□□□ -0.87
SPT20YOL148C CYS4P32582 507 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C HXT6P39003 570 aaKnown RBP9.61□□□□□ -0.87
SPT20YOL148C HXT7P39004 570 aa9.61□□□□□ -0.87
SPT20YOL148C KHA1P40309 873 aa9.61□□□□□ -0.87
SPT20YOL148C VHR1P40522 640 aa9.61□□□□□ -0.87
SPT20YOL148C AGP3P43548 558 aa9.61□□□□□ -0.87
SPT20YOL148C FAR10Q06001 478 aa9.61□□□□□ -0.87
SPT20YOL148C MCP2Q06567 569 aa9.61□□□□□ -0.87
SPT20YOL148C IRC3Q06683 689 aa9.61□□□□□ -0.87
SPT20YOL148C IWR1Q07532 353 aaPredicted RBP9.61□□□□□ -0.87
SPT20YOL148C FMP45Q07651 309 aa9.61□□□□□ -0.87
SPT20YOL148C NTG2Q08214 380 aa9.61□□□□□ -0.87
SPT20YOL148C IMA2Q08295 589 aa9.61□□□□□ -0.87
SPT20YOL148C BI3Q9ZZW7 517 aa9.61□□□□□ -0.87
SPT20YOL148C RHO1P06780 209 aaKnown RBP9.6□□□□□ -0.87
SPT20YOL148C POL4P25615 582 aa9.6□□□□□ -0.87
SPT20YOL148C HEM12P32347 362 aaPredicted RBP9.6□□□□□ -0.87
SPT20YOL148C TYE7P33122 291 aaPredicted RBP9.6□□□□□ -0.87
SPT20YOL148C DYS1P38791 387 aa9.6□□□□□ -0.87
SPT20YOL148C SAW1P39735 261 aa9.6□□□□□ -0.87
SPT20YOL148C PSF2P40359 213 aa9.6□□□□□ -0.87
SPT20YOL148C DOT5P40553 215 aa9.6□□□□□ -0.87
SPT20YOL148C FAR7P43592 221 aa9.6□□□□□ -0.87
SPT20YOL148C ALY2P47029 1046 aa9.6□□□□□ -0.87
SPT20YOL148C CPR7P47103 393 aa9.6□□□□□ -0.87
SPT20YOL148C PUS6P53294 404 aa9.6□□□□□ -0.87
SPT20YOL148C BNI4P53858 892 aa9.6□□□□□ -0.87
SPT20YOL148C YMR209CQ03648 457 aa9.6□□□□□ -0.87
SPT20YOL148C KAP95Q06142 861 aaKnown RBP9.6□□□□□ -0.87
SPT20YOL148C YPL191CQ08930 360 aa9.6□□□□□ -0.87
SPT20YOL148C KCS1Q12494 1050 aa9.6□□□□□ -0.87
SPT20YOL148C AVL9Q12500 764 aa9.6□□□□□ -0.87
SPT20YOL148C STE2D6VTK4 431 aa9.59□□□□□ -0.87
SPT20YOL148C NMT1P14743 455 aa9.59□□□□□ -0.87
SPT20YOL148C RNR1P21524 888 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C CLB3P24870 427 aa9.59□□□□□ -0.87
SPT20YOL148C BUD31P25337 157 aaPredicted RBP9.59□□□□□ -0.87
SPT20YOL148C CRM1P30822 1084 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C NGG1P32494 702 aa9.59□□□□□ -0.87
SPT20YOL148C PRP19P32523 503 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C CYM1P32898 989 aa9.59□□□□□ -0.87
SPT20YOL148C EAP1P36041 632 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C SEC31P38968 1273 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C SER3P40054 469 aa9.59□□□□□ -0.87
SPT20YOL148C YRB2P40517 327 aa9.59□□□□□ -0.87
SPT20YOL148C HAM1P47119 197 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C ECL1P48235 211 aa9.59□□□□□ -0.87
SPT20YOL148C IMD3P50095 523 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C GPI1P53306 609 aa9.59□□□□□ -0.87
SPT20YOL148C CUS2P53830 285 aaPredicted RBP9.59□□□□□ -0.87
SPT20YOL148C PEX10Q05568 337 aa9.59□□□□□ -0.87
SPT20YOL148C GMC2Q06201 188 aa9.59□□□□□ -0.87
SPT20YOL148C LAM6Q08001 693 aa9.59□□□□□ -0.87
SPT20YOL148C CUE5Q08412 411 aaKnown RBP9.59□□□□□ -0.87
SPT20YOL148C MED2Q12124 431 aa9.59□□□□□ -0.87
SPT20YOL148C HSH49Q99181 213 aaPredicted RBP9.59□□□□□ -0.87
SPT20YOL148C RAD18P10862 487 aa9.59□□□□□ -0.88
SPT20YOL148C STF2P16965 84 aa9.59□□□□□ -0.88
SPT20YOL148C EST1P17214 699 aaPredicted RBP9.59□□□□□ -0.88
SPT20YOL148C SSA4P22202 642 aaKnown RBP9.59□□□□□ -0.88
SPT20YOL148C TRX1P22217 103 aaKnown RBP9.59□□□□□ -0.88
SPT20YOL148C BCS1P32839 456 aa9.59□□□□□ -0.88
SPT20YOL148C PIN4P34217 668 aaKnown RBP RIP-Chip data9.59□□□□□ -0.88not detected
SPT20YOL148C NAB3P38996 802 aaKnown RBP RIP-Chip data9.59□□□□□ -0.88not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms