RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C TMA16Q08687 178 aa3.65□□□□□ -1.82
VPS9YML097C YBR126W-AQ8TGU7 68 aa3.65□□□□□ -1.82
VPS9YML097C TUB2P02557 457 aaKnown RBP3.64□□□□□ -1.83
VPS9YML097C TRP4P07285 380 aaPredicted RBP3.64□□□□□ -1.83
VPS9YML097C CDC24P11433 854 aaPredicted RBP3.64□□□□□ -1.83
VPS9YML097C SGF29P25554 259 aa3.64□□□□□ -1.83
VPS9YML097C PEP3P27801 918 aa3.64□□□□□ -1.83
VPS9YML097C BLI1P35727 113 aa3.64□□□□□ -1.83
VPS9YML097C PHO11P35842 467 aa3.64□□□□□ -1.83
VPS9YML097C ESL2P36168 1195 aa3.64□□□□□ -1.83
VPS9YML097C YBR225WP38321 900 aa3.64□□□□□ -1.83
VPS9YML097C PHO12P38693 467 aa3.64□□□□□ -1.83
VPS9YML097C LNP1P38878 278 aa3.64□□□□□ -1.83
VPS9YML097C PSD1P39006 500 aa3.64□□□□□ -1.83
VPS9YML097C YSA1Q01976 231 aa3.64□□□□□ -1.83
VPS9YML097C MFM1Q02783 413 aa3.64□□□□□ -1.83
VPS9YML097C RAD30Q04049 632 aa3.64□□□□□ -1.83
VPS9YML097C USV1Q12132 391 aa3.64□□□□□ -1.83
VPS9YML097C TRM13Q12383 476 aa3.64□□□□□ -1.83
VPS9YML097C SNU66Q12420 587 aaPredicted RBP3.64□□□□□ -1.83
VPS9YML097C YKL033W-AQ86ZR7 236 aa3.64□□□□□ -1.83
VPS9YML097C SOD2P00447 233 aa3.63□□□□□ -1.83
VPS9YML097C SEC53P07283 254 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C SUI3P09064 285 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C HOM3P10869 527 aa3.63□□□□□ -1.83
VPS9YML097C RED1P14291 827 aa3.63□□□□□ -1.83
VPS9YML097C PRE8P23639 250 aa3.63□□□□□ -1.83
VPS9YML097C ERG8P24521 451 aa3.63□□□□□ -1.83
VPS9YML097C FUB1P25659 250 aa3.63□□□□□ -1.83
VPS9YML097C MRPL7P36519 292 aa3.63□□□□□ -1.83
VPS9YML097C YBL029WP38201 376 aa3.63□□□□□ -1.83
VPS9YML097C YHR097CP38809 366 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C YIL161WP40449 235 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C YJL163CP46996 555 aa3.63□□□□□ -1.83
VPS9YML097C FCP1Q03254 732 aa3.63□□□□□ -1.83
VPS9YML097C VAM6Q07468 1049 aa3.63□□□□□ -1.83
VPS9YML097C IZH3Q07959 543 aa3.63□□□□□ -1.83
VPS9YML097C FRE5Q08908 694 aa3.63□□□□□ -1.83
VPS9YML097C MLH3Q12083 715 aa3.63□□□□□ -1.83
VPS9YML097C LYS21Q12122 440 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C BIK1P11709 440 aa3.63□□□□□ -1.83
VPS9YML097C MSS1P32559 526 aaPredicted RBP3.63□□□□□ -1.83
VPS9YML097C ALY1P36117 915 aa3.63□□□□□ -1.83
VPS9YML097C CTP1P38152 299 aa3.63□□□□□ -1.83
VPS9YML097C FMP10P40098 244 aa3.63□□□□□ -1.83
VPS9YML097C PFK26P40433 827 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C CIR1P42940 261 aa3.63□□□□□ -1.83
VPS9YML097C ARC1P46672 376 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C ASE1P50275 885 aa3.63□□□□□ -1.83
VPS9YML097C DSD1P53095 428 aa3.63□□□□□ -1.83
VPS9YML097C RIM8P53179 542 aa3.63□□□□□ -1.83
VPS9YML097C NMA2P53204 395 aa3.63□□□□□ -1.83
VPS9YML097C DIP5P53388 608 aa3.63□□□□□ -1.83
VPS9YML097C ARE2P53629 642 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C CSL4P53859 292 aaPredicted RBP3.63□□□□□ -1.83
VPS9YML097C MTG1Q03151 367 aaPredicted RBP3.63□□□□□ -1.83
VPS9YML097C EFR3Q03653 782 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C TAF11Q04226 346 aa3.63□□□□□ -1.83
VPS9YML097C YSH1Q06224 779 aaPredicted RBP3.63□□□□□ -1.83
VPS9YML097C YDL086WQ07505 273 aa3.63□□□□□ -1.83
VPS9YML097C GRC3Q07845 632 aa3.63□□□□□ -1.83
VPS9YML097C NUS1Q12063 375 aa3.63□□□□□ -1.83
VPS9YML097C ERG27Q12452 347 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C RVB2Q12464 471 aaKnown RBP3.63□□□□□ -1.83
VPS9YML097C GCN4P03069 281 aa3.62□□□□□ -1.83
VPS9YML097C ARG3P05150 338 aa3.62□□□□□ -1.83
VPS9YML097C MET17P06106 444 aa3.62□□□□□ -1.83
VPS9YML097C ABF1P14164 731 aa3.62□□□□□ -1.83
VPS9YML097C THR1P17423 357 aaKnown RBP3.62□□□□□ -1.83
VPS9YML097C PRP6P19735 899 aaPredicted RBP3.62□□□□□ -1.83
VPS9YML097C OLE1P21147 510 aaKnown RBP3.62□□□□□ -1.83
VPS9YML097C VPS34P22543 875 aa3.62□□□□□ -1.83
VPS9YML097C YCK1P23291 538 aa3.62□□□□□ -1.83
VPS9YML097C VMA8P32610 256 aaKnown RBP3.62□□□□□ -1.83
VPS9YML097C PXA2P34230 853 aa3.62□□□□□ -1.83
VPS9YML097C TPA1P40032 644 aaKnown RBP3.62□□□□□ -1.83
VPS9YML097C ARF3P40994 183 aaRIP-Chip data3.62□□□□□ -1.83not detected
VPS9YML097C GPD2P41911 440 aaKnown RBP3.62□□□□□ -1.83
VPS9YML097C IRC6P43615 237 aa3.62□□□□□ -1.83
VPS9YML097C SIP4P46954 829 aa3.62□□□□□ -1.83
VPS9YML097C MNN10P50108 393 aaKnown RBP3.62□□□□□ -1.83
VPS9YML097C YGR151CP53287 111 aa3.62□□□□□ -1.83
VPS9YML097C YPL071CQ02864 156 aa3.62□□□□□ -1.83
VPS9YML097C TRS23Q03784 219 aa3.62□□□□□ -1.83
VPS9YML097C SPN1Q06505 410 aaPredicted RBP3.62□□□□□ -1.83
VPS9YML097C SCM3Q12334 223 aa3.62□□□□□ -1.83
VPS9YML097C YER175W-AQ8TGU4 54 aa3.62□□□□□ -1.83
VPS9YML097C RPB2P08518 1224 aaKnown RBP3.61□□□□□ -1.83
VPS9YML097C ERG4P25340 473 aa3.61□□□□□ -1.83
VPS9YML097C YCR061WP25639 631 aa3.61□□□□□ -1.83
VPS9YML097C URK1P27515 501 aa3.61□□□□□ -1.83
VPS9YML097C CAP1P28495 268 aaKnown RBP3.61□□□□□ -1.83
VPS9YML097C EFT1P32324 842 aaKnown RBP3.61□□□□□ -1.83
VPS9YML097C SAC6P32599 642 aaKnown RBP3.61□□□□□ -1.83
VPS9YML097C MTH1P35198 433 aa3.61□□□□□ -1.83
VPS9YML097C ARO9P38840 513 aaPredicted RBP3.61□□□□□ -1.83
VPS9YML097C RTS1P38903 757 aa3.61□□□□□ -1.83
VPS9YML097C NPR2P39923 615 aa3.61□□□□□ -1.83
VPS9YML097C FMP52P40008 231 aa3.61□□□□□ -1.83
VPS9YML097C JHD1P40034 492 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms