RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	NTG2	Q08214	380 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	PUS7	Q08647	676 aa	Known RBP	7.45	□□□□□ -1.22
AFG2	YLR397C	DIT1	P21623	536 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	YBR225W	P38321	900 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	LNP1	P38878	278 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	MTW1	P39731	289 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	FET5	P43561	622 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	YFL034W	P43564	1073 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	SEH1	P53011	349 aa	Known RBP	7.45	□□□□□ -1.22
AFG2	YLR397C	PET117	Q02771	107 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	ESF1	Q06344	628 aa	Known RBP	7.45	□□□□□ -1.22
AFG2	YLR397C	YPL216W	Q08964	1102 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	ICL2	Q12031	575 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	RCN2	Q12044	265 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	SIR3	P06701	978 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	ERG11	P10614	530 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	STE12	P13574	688 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	RDS2	P19541	446 aa	Known RBP	7.44	□□□□□ -1.22
AFG2	YLR397C	NPP1	P25353	742 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	TFC1	P32367	649 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	KRE6	P32486	720 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	ANP1	P32629	500 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	MRS6	P32864	603 aa	Known RBP	7.44	□□□□□ -1.22
AFG2	YLR397C	NTR2	P36118	322 aa	Predicted RBP	7.44	□□□□□ -1.22
AFG2	YLR397C	CHK1	P38147	527 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	SMF2	P38778	549 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.44	□□□□□ -1.22	not detected
AFG2	YLR397C	SER3	P40054	469 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	PIG2	P40187	538 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	BSC2	Q05611	235 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	ECI1	Q05871	280 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	MHR1	Q06630	226 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	RTR2	Q12378	196 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	SKM1	Q12469	655 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	STF2	P16965	84 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	PHO81	P17442	1178 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	ATG22	P25568	528 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	KRR1	P25586	316 aa	Predicted RBP	7.44	□□□□□ -1.22
AFG2	YLR397C	SCT1	P32784	759 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	TAF14	P35189	244 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	SBE22	P38814	852 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	YAT2	P40017	923 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	YJL016W	P47072	561 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	TRF5	P48561	642 aa	Known RBP	7.44	□□□□□ -1.22
AFG2	YLR397C	DAM1	P53267	343 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	BRE4	Q07660	1125 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	ALE1	Q08548	619 aa		7.44	□□□□□ -1.22
AFG2	YLR397C	GFD2	P25370	566 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	RRT12	P25381	491 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	BCK2	P33306	851 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	LRG1	P35688	1017 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	RXT2	P38255	430 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	GIC1	P38785	314 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	SPC97	P38863	823 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	DSS1	P39112	969 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	SEO1	P39709	593 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	RAI1	P53063	387 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	SIW14	P53965	281 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	SRL4	Q03085	281 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	NGL2	Q03264	515 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	VHS1	Q03785	461 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	RAD33	Q04231	177 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	RQC1	Q05468	723 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	YDR278C	Q05612	105 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	EAF1	Q06337	982 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	FLC1	Q08967	793 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	ATG31	Q12421	196 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	CHO2	P05374	869 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	ILV2	P07342	687 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	CYM1	P32898	989 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	CBR1	P38626	284 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	RIM4	P38741	713 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	STM1	P39015	273 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	NUP85	P46673	744 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	HGH1	P48362	394 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	ASE1	P50275	885 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	YPL034W	Q03083	165 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	CLU1	Q03690	1277 aa	Known RBP	7.43	□□□□□ -1.22
AFG2	YLR397C	HMS1	Q12398	434 aa		7.43	□□□□□ -1.22
AFG2	YLR397C	STE3	P06783	470 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	PMT2	P31382	759 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	MET1	P36150	593 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	ETR1	P38071	380 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	PTC2	P39966	464 aa	Known RBP	7.42	□□□□□ -1.22
AFG2	YLR397C	CST6	P40535	587 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	AIP1	P46680	615 aa	Known RBP	7.42	□□□□□ -1.22
AFG2	YLR397C	MAD3	P47074	515 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	RPC17	P47076	161 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	UPF3	P48412	387 aa	Known RBP	7.42	□□□□□ -1.22
AFG2	YLR397C	HSH155	P49955	971 aa	Known RBP	7.42	□□□□□ -1.22
AFG2	YLR397C	RIM8	P53179	542 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	REC102	Q02721	264 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	URC2	Q04411	772 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	PDR8	Q06149	701 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	YPR202W	Q08993	238 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	MCD1	Q12158	566 aa		7.42	□□□□□ -1.22
AFG2	YLR397C	YSP3	P25036	478 aa		7.41	□□□□□ -1.22
AFG2	YLR397C	YKL023W	P36103	277 aa	Known RBP	7.41	□□□□□ -1.22
AFG2	YLR397C	TPA1	P40032	644 aa	Known RBP	7.41	□□□□□ -1.22
AFG2	YLR397C	YJL070C	P40361	888 aa		7.41	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms