RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C PGS1P25578 521 aa4.26□□□□□ -1.73
SRP40YKR092C POL4P25615 582 aa4.26□□□□□ -1.73
SRP40YKR092C IMG2P25642 146 aaPredicted RBP4.26□□□□□ -1.73
SRP40YKR092C DAL3P32459 195 aa4.26□□□□□ -1.73
SRP40YKR092C DPH5P32469 300 aaPredicted RBP4.26□□□□□ -1.73
SRP40YKR092C YKU70P32807 602 aa4.26□□□□□ -1.73
SRP40YKR092C OAF3P36023 863 aa4.26□□□□□ -1.73
SRP40YKR092C PPS1P38148 807 aa4.26□□□□□ -1.73
SRP40YKR092C YBR071WP38243 211 aa4.26□□□□□ -1.73
SRP40YKR092C HSM3P38348 480 aa4.26□□□□□ -1.73
SRP40YKR092C BCD1P38772 366 aa4.26□□□□□ -1.73
SRP40YKR092C REV7P38927 245 aa4.26□□□□□ -1.73
SRP40YKR092C LYS9P38999 446 aa4.26□□□□□ -1.73
SRP40YKR092C CCT3P39077 534 aaKnown RBP4.26□□□□□ -1.73
SRP40YKR092C NUP60P39705 539 aa4.26□□□□□ -1.73
SRP40YKR092C SPC72P39723 622 aa4.26□□□□□ -1.73
SRP40YKR092C UBC11P52492 156 aa4.26□□□□□ -1.73
SRP40YKR092C YNL050CP53952 270 aa4.26□□□□□ -1.73
SRP40YKR092C SPO19Q03029 223 aa4.26□□□□□ -1.73
SRP40YKR092C RRN11Q04712 507 aa4.26□□□□□ -1.73
SRP40YKR092C ADE13Q05911 482 aaKnown RBP4.26□□□□□ -1.73
SRP40YKR092C RMP1Q12530 201 aa4.26□□□□□ -1.73
SRP40YKR092C YBL111CQ3E7Y5 667 aa4.26□□□□□ -1.73
SRP40YKR092C ECM3Q99252 613 aa4.26□□□□□ -1.73
SRP40YKR092C FRS1P15624 595 aaKnown RBP4.25□□□□□ -1.73
SRP40YKR092C AEP2P22136 580 aa4.25□□□□□ -1.73
SRP40YKR092C SEC15P22224 910 aa4.25□□□□□ -1.73
SRP40YKR092C PEX1P24004 1043 aa4.25□□□□□ -1.73
SRP40YKR092C NTG1P31378 399 aa4.25□□□□□ -1.73
SRP40YKR092C MVD1P32377 396 aaKnown RBP4.25□□□□□ -1.73
SRP40YKR092C PET127P32606 800 aa4.25□□□□□ -1.73
SRP40YKR092C FAT1P38225 669 aa4.25□□□□□ -1.73
SRP40YKR092C TOM71P38825 639 aaKnown RBP4.25□□□□□ -1.73
SRP40YKR092C CHS7P38843 316 aa4.25□□□□□ -1.73
SRP40YKR092C GET2P40056 285 aa4.25□□□□□ -1.73
SRP40YKR092C GPP2P40106 250 aaKnown RBP4.25□□□□□ -1.73
SRP40YKR092C MET18P40469 1032 aa4.25□□□□□ -1.73
SRP40YKR092C YNL144CP53907 740 aa4.25□□□□□ -1.73
SRP40YKR092C NOP15P53927 220 aaPredicted RBP4.25□□□□□ -1.73
SRP40YKR092C SSQ1Q05931 657 aaPredicted RBP4.25□□□□□ -1.73
SRP40YKR092C VPS36Q06696 566 aa4.25□□□□□ -1.73
SRP40YKR092C CSR1Q06705 408 aaKnown RBP4.25□□□□□ -1.73
SRP40YKR092C APM4Q99186 491 aa4.25□□□□□ -1.73
SRP40YKR092C DNF2Q12675 1612 aa4.24□□□□□ -1.73
SRP40YKR092C IML1P47170 1584 aa4.24□□□□□ -1.73
SRP40YKR092C RPS17AP02407 136 aaKnown RBP4.24□□□□□ -1.73
SRP40YKR092C PCT1P13259 424 aa4.24□□□□□ -1.73
SRP40YKR092C RPS17BP14127 136 aaKnown RBP4.24□□□□□ -1.73
SRP40YKR092C NOP4P37838 685 aaKnown RBP4.24□□□□□ -1.73
SRP40YKR092C SLX1P38324 304 aa4.24□□□□□ -1.73
SRP40YKR092C FMO1P38866 432 aa4.24□□□□□ -1.73
SRP40YKR092C SHC1P39000 512 aa4.24□□□□□ -1.73
SRP40YKR092C DUN1P39009 513 aa4.24□□□□□ -1.73
SRP40YKR092C MTW1P39731 289 aa4.24□□□□□ -1.73
SRP40YKR092C FMP52P40008 231 aa4.24□□□□□ -1.73
SRP40YKR092C MAM1P40065 302 aa4.24□□□□□ -1.73
SRP40YKR092C VID27P40157 782 aa4.24□□□□□ -1.73
SRP40YKR092C RIC1P40395 1056 aa4.24□□□□□ -1.73
SRP40YKR092C GCD10P41814 478 aa4.24□□□□□ -1.73
SRP40YKR092C NUP84P52891 726 aa4.24□□□□□ -1.73
SRP40YKR092C PEX14P53112 341 aa4.24□□□□□ -1.73
SRP40YKR092C HST1P53685 503 aa4.24□□□□□ -1.73
SRP40YKR092C ADA2Q02336 434 aa4.24□□□□□ -1.73
SRP40YKR092C ERO1Q03103 563 aa4.24□□□□□ -1.73
SRP40YKR092C YMR206WQ03695 313 aa4.24□□□□□ -1.73
SRP40YKR092C VBA4Q04602 768 aaKnown RBP4.24□□□□□ -1.73
SRP40YKR092C YPS7Q06325 596 aa4.24□□□□□ -1.73
SRP40YKR092C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
SRP40YKR092C RIO1Q12196 484 aaKnown RBP4.24□□□□□ -1.73
SRP40YKR092C ENT1Q12518 454 aa4.24□□□□□ -1.73
SRP40YKR092C DOP1Q03921 1698 aa4.24□□□□□ -1.73
SRP40YKR092C MET5P47169 1442 aa4.23□□□□□ -1.73
SRP40YKR092C SEC7P11075 2009 aaKnown RBP4.23□□□□□ -1.73
SRP40YKR092C ERG20P08524 352 aaKnown RBP4.23□□□□□ -1.73
SRP40YKR092C GLN4P13188 809 aaKnown RBP4.23□□□□□ -1.73
SRP40YKR092C SSH4P32343 579 aa4.23□□□□□ -1.73
SRP40YKR092C PUP2P32379 260 aa4.23□□□□□ -1.73
SRP40YKR092C HIR1P32479 840 aa4.23□□□□□ -1.73
SRP40YKR092C PXA2P34230 853 aa4.23□□□□□ -1.73
SRP40YKR092C YAP3P38749 330 aa4.23□□□□□ -1.73
SRP40YKR092C SMC2P38989 1170 aaKnown RBP4.23□□□□□ -1.73
SRP40YKR092C IES5P40060 125 aa4.23□□□□□ -1.73
SRP40YKR092C RTR1P40084 226 aaPredicted RBP4.23□□□□□ -1.73
SRP40YKR092C SAP185P40856 1058 aa4.23□□□□□ -1.73
SRP40YKR092C IAH1P41734 238 aa4.23□□□□□ -1.73
SRP40YKR092C DAS1P47005 663 aa4.23□□□□□ -1.73
SRP40YKR092C NIT2P47016 307 aa4.23□□□□□ -1.73
SRP40YKR092C BIT61P47041 543 aa4.23□□□□□ -1.73
SRP40YKR092C TRF5P48561 642 aaKnown RBP4.23□□□□□ -1.73
SRP40YKR092C PAN2P53010 1115 aaPredicted RBP4.23□□□□□ -1.73
SRP40YKR092C SPC105P53148 917 aa4.23□□□□□ -1.73
SRP40YKR092C RSC1P53236 928 aa4.23□□□□□ -1.73
SRP40YKR092C COG6P53959 839 aa4.23□□□□□ -1.73
SRP40YKR092C RSM28Q03430 361 aa4.23□□□□□ -1.73
SRP40YKR092C SKY1Q03656 742 aa4.23□□□□□ -1.73
SRP40YKR092C YMR018WQ04364 514 aa4.23□□□□□ -1.73
SRP40YKR092C YOR378WQ08902 515 aa4.23□□□□□ -1.73
SRP40YKR092C YPR027CQ12079 277 aa4.23□□□□□ -1.73
SRP40YKR092C NUP192P47054 1683 aa4.22□□□□□ -1.73
SRP40YKR092C YRF1-1P0CX20 1796 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 98.6 ms