RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W YMR155WQ03795 547 aa6.85□□□□□ -1.31
NMD5YJR132W XRN1P22147 1528 aaKnown RBP6.85□□□□□ -1.31
NMD5YJR132W SNT2P53127 1403 aa6.85□□□□□ -1.31
NMD5YJR132W GDA1P32621 518 aa6.85□□□□□ -1.31
NMD5YJR132W YBL010CP32788 280 aa6.85□□□□□ -1.31
NMD5YJR132W MAE1P36013 669 aaKnown RBP6.85□□□□□ -1.31
NMD5YJR132W MRX3P38172 270 aa6.85□□□□□ -1.31
NMD5YJR132W EMP65P40085 556 aa6.85□□□□□ -1.31
NMD5YJR132W REF2P42073 533 aaPredicted RBP6.85□□□□□ -1.31
NMD5YJR132W BNA3P47039 444 aaKnown RBP6.85□□□□□ -1.31
NMD5YJR132W PGA2P53903 129 aa6.85□□□□□ -1.31
NMD5YJR132W VPS38Q05919 439 aa6.85□□□□□ -1.31
NMD5YJR132W BBP1Q12365 385 aa6.85□□□□□ -1.31
NMD5YJR132W AI4P03878 556 aa6.84□□□□□ -1.31
NMD5YJR132W URA7P28274 579 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W GPI10P30777 616 aa6.84□□□□□ -1.31
NMD5YJR132W RAD5P32849 1169 aaPredicted RBP6.84□□□□□ -1.31
NMD5YJR132W MCM7P38132 845 aa6.84□□□□□ -1.31
NMD5YJR132W PCS60P38137 543 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
NMD5YJR132W RFC5P38251 354 aa6.84□□□□□ -1.31
NMD5YJR132W LSM12P38828 187 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W GDI1P39958 451 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W MAL11P53048 616 aa6.84□□□□□ -1.31
NMD5YJR132W ECM23Q02710 187 aa6.84□□□□□ -1.31
NMD5YJR132W GPN2Q08726 347 aaPredicted RBP6.84□□□□□ -1.31
NMD5YJR132W LEU9Q12166 604 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W RTR2Q12378 196 aa6.84□□□□□ -1.31
NMD5YJR132W MHP1P43638 1398 aa6.84□□□□□ -1.31
NMD5YJR132W REV3P14284 1504 aa6.84□□□□□ -1.31
NMD5YJR132W PHO5P00635 467 aa6.84□□□□□ -1.31
NMD5YJR132W TAL1P15019 335 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W BUD31P25337 157 aaPredicted RBP6.84□□□□□ -1.31
NMD5YJR132W PAT1P25644 796 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W SEC61P32915 480 aa6.84□□□□□ -1.31
NMD5YJR132W MDJ1P35191 511 aa6.84□□□□□ -1.31
NMD5YJR132W SUR2P38992 349 aa6.84□□□□□ -1.31
NMD5YJR132W STT3P39007 718 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W GIM4P40005 111 aaKnown RBP6.84□□□□□ -1.31
NMD5YJR132W NET1P47035 1189 aa6.84□□□□□ -1.31
NMD5YJR132W FIN1Q03898 291 aa6.84□□□□□ -1.31
NMD5YJR132W YDR514CQ04408 483 aa6.84□□□□□ -1.31
NMD5YJR132W DFG5Q05031 458 aa6.84□□□□□ -1.31
NMD5YJR132W ARP6Q12509 438 aa6.84□□□□□ -1.31
NMD5YJR132W SCEIP03882 235 aa6.83□□□□□ -1.32
NMD5YJR132W CHS1P08004 1131 aa6.83□□□□□ -1.32
NMD5YJR132W SSH1P38353 490 aaKnown RBP6.83□□□□□ -1.32
NMD5YJR132W LNP1P38878 278 aa6.83□□□□□ -1.32
NMD5YJR132W TYW3P53177 273 aa6.83□□□□□ -1.32
NMD5YJR132W CWC24P53769 259 aa6.83□□□□□ -1.32
NMD5YJR132W RPT6Q01939 405 aaKnown RBP6.83□□□□□ -1.32
NMD5YJR132W RMD1Q03441 430 aa6.83□□□□□ -1.32
NMD5YJR132W LDB17Q12342 491 aa6.83□□□□□ -1.32
NMD5YJR132W ARD1P07347 238 aaPredicted RBP6.83□□□□□ -1.32
NMD5YJR132W KIN3P22209 435 aa6.83□□□□□ -1.32
NMD5YJR132W SPC29P33419 253 aa6.83□□□□□ -1.32
NMD5YJR132W SCC4P40090 624 aa6.83□□□□□ -1.32
NMD5YJR132W HIS6P40545 261 aa6.83□□□□□ -1.32
NMD5YJR132W TMA22P47089 198 aaPredicted RBP6.83□□□□□ -1.32
NMD5YJR132W HDA1P53973 706 aa6.83□□□□□ -1.32
NMD5YJR132W SMA1Q02651 245 aa6.83□□□□□ -1.32
NMD5YJR132W REC102Q02721 264 aa6.83□□□□□ -1.32
NMD5YJR132W BCP1Q06338 283 aa6.83□□□□□ -1.32
NMD5YJR132W FAP7Q12055 197 aaPredicted RBP6.83□□□□□ -1.32
NMD5YJR132W SKS1Q12505 502 aa6.83□□□□□ -1.32
NMD5YJR132W RRP12Q12754 1228 aaKnown RBP6.83□□□□□ -1.32
NMD5YJR132W AFT1P22149 690 aa6.83□□□□□ -1.32
NMD5YJR132W ADP1P25371 1049 aa6.83□□□□□ -1.32
NMD5YJR132W BUD23P25627 275 aaPredicted RBP6.83□□□□□ -1.32
NMD5YJR132W RPD3P32561 433 aa6.83□□□□□ -1.32
NMD5YJR132W BOL3P39724 118 aa6.83□□□□□ -1.32
NMD5YJR132W ILM1P47155 203 aa6.83□□□□□ -1.32
NMD5YJR132W SNP1Q00916 300 aaPredicted RBP6.83□□□□□ -1.32
NMD5YJR132W CIK1Q01649 594 aa6.83□□□□□ -1.32
NMD5YJR132W NAN1Q02931 896 aaKnown RBP6.83□□□□□ -1.32
NMD5YJR132W PUS7Q08647 676 aaKnown RBP6.83□□□□□ -1.32
NMD5YJR132W SRD1P09007 221 aa6.82□□□□□ -1.32
NMD5YJR132W SMC1P32908 1225 aa6.82□□□□□ -1.32
NMD5YJR132W MRPL7P36519 292 aa6.82□□□□□ -1.32
NMD5YJR132W AMN1P38285 549 aaPredicted RBP6.82□□□□□ -1.32
NMD5YJR132W RTR1P40084 226 aaPredicted RBP6.82□□□□□ -1.32
NMD5YJR132W YIL001WP40560 513 aa6.82□□□□□ -1.32
NMD5YJR132W RSM26P47141 266 aa6.82□□□□□ -1.32
NMD5YJR132W ROM1P53046 1155 aa6.82□□□□□ -1.32
NMD5YJR132W ORC4P54791 529 aa6.82□□□□□ -1.32
NMD5YJR132W UFD2P54860 961 aa6.82□□□□□ -1.32
NMD5YJR132W CIA1Q05583 330 aa6.82□□□□□ -1.32
NMD5YJR132W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
NMD5YJR132W ENO2P00925 437 aaKnown RBP6.82□□□□□ -1.32
NMD5YJR132W RER1P25560 188 aa6.82□□□□□ -1.32
NMD5YJR132W YCR016WP25617 290 aaKnown RBP6.82□□□□□ -1.32
NMD5YJR132W SEC1P30619 724 aaKnown RBP6.82□□□□□ -1.32
NMD5YJR132W ERG3P32353 365 aa6.82□□□□□ -1.32
NMD5YJR132W RFT1P38206 574 aaPredicted RBP6.82□□□□□ -1.32
NMD5YJR132W MRX1P40050 688 aa6.82□□□□□ -1.32
NMD5YJR132W COQ6P53318 479 aa6.82□□□□□ -1.32
NMD5YJR132W TUB4P53378 473 aa6.82□□□□□ -1.32
NMD5YJR132W YKR005CQ02203 525 aa6.82□□□□□ -1.32
NMD5YJR132W YPL071CQ02864 156 aa6.82□□□□□ -1.32
NMD5YJR132W PML1Q07930 204 aaPredicted RBP6.82□□□□□ -1.32
NMD5YJR132W TIP41Q12199 356 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms